DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoYb and Ddx17

DIOPT Version :9

Sequence 1:NP_001245959.1 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_951062.1 Gene:Ddx17 / 67040 MGIID:1914290 Length:652 Species:Mus musculus


Alignment Length:492 Identity:93/492 - (18%)
Similarity:181/492 - (36%) Gaps:97/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 NPSERSVQK--NRSQMPNSN----------VSTTKRCVEKMHVCRSENMGDRKPSVCLKHLVLAH 468
            ||.||..:|  :.|::|...          ...|...|:::.  |.:.:..|...||.|      
Mouse    33 NPGERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELR--RKKEITVRGGDVCPK------ 89

  Fly   469 SPEPVNPVTSYKELPLGNTILNAMDDLNFQTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSYLP 533
                  ||.::........:::.:.|.:|..|.|.|...:|..::...:|.:..:|:|::.:|| 
Mouse    90 ------PVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYL- 147

  Fly   534 VICSSVLSSFENVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDF-NTQNLKVVNTHAH 597
                  |.:..::..........||:.:::..:    ::||...:.:..|: ....||....:..
Mouse   148 ------LPAIVHINHQPYLERGDGPICLVLAPT----RELAQQVQQVADDYGKCSRLKSTCIYGG 202

  Fly   598 SMMDVYMM-LLNSCGVLVTTLAHLNNILSNELPLVNPTRLEFIIFDDYDRKRLDNAELLKEVFQK 661
            :.....:. |.....:.:.|...|.:.|  |....|..|..:::.|:.|| .||.          
Mouse   203 APKGPQIRDLERGVEICIATPGRLIDFL--ESGKTNLRRCTYLVLDEADR-MLDM---------- 254

  Fly   662 VNSIGGLSKQLVLVAQQWHSERFQKLLNRTTKP---LILFGDFLEAALYGGLKFNVTLRSSALKA 723
                 |...|:..:..|...:| |.|:...|.|   ..|..|||..  |..:.......|:....
Mouse   255 -----GFEPQIRKIVDQIRPDR-QTLMWSATWPKEVRQLAEDFLRD--YTQINVGNLELSANHNI 311

  Fly   724 RQLLDILAEQDGSKKRTLIYCKNQMELEELSAILIEAGLQCVDISKAQNQS--PNRLMLVDDSQV 786
            .|::|:..|.:...|...:..:...|.|..:.|.:|...:|.|:::...:.  |...:..|.||.
Mouse   312 LQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQP 376

  Fly   787 RKQ-----------------------LPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRN----L 824
            .:.                       |.|.:::.:|::..|.|...:..|....|.:...    .
Mouse   377 ERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYT 441

  Fly   825 FTKP--IGRGQDLITYILMDENNAKEWPRIMKFLQDH 859
            |..|  :.:.::||.  :::|.|....|::|: |.||
Mouse   442 FFTPGNLKQARELIK--VLEEANQAINPKLMQ-LVDH 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_001245959.1 TUDOR 7..115 CDD:278965
SrmB 475..877 CDD:223587 79/421 (19%)
P-loop_NTPase 480..>646 CDD:304359 27/167 (16%)
TUDOR 927..1043 CDD:278965
Ddx17NP_951062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 3/4 (75%)
DEXDc 32..502 CDD:331760 93/492 (19%)
Q motif 92..120 4/27 (15%)
DEAD box 246..249 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..652
Interaction with YAP1. /evidence=ECO:0000250|UniProtKB:Q92841 641..649
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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