DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoYb and Prp5

DIOPT Version :10

Sequence 1:NP_609335.3 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:899 Identity:155/899 - (17%)
Similarity:317/899 - (35%) Gaps:239/899 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LKDYCSSERTKQVYVEDERVIVRYQRWSPPKLVRGVVRRRQNEEYLVWILDYGFNLCCSVWDLWP 110
            |...||.|..:::..|::      ||    :|.:.:::||:..|                  .| 
  Fly   169 LSTSCSEEEVEEIDKEEQ------QR----RLEQEMIKRRERIE------------------RW- 204

  Fly   111 LPDHLSRSLCDFKEGGVALIAP---HSGSVWSRSAIESLDKQLEDANQLTFQVVHRGKSNRNFGL 172
               ...|.    ::...|::||   :|...||          |||.::                 
  Fly   205 ---RAERK----RDTKAAVVAPSLVNSAKKWS----------LEDESE----------------- 235

  Fly   173 LKFRSSCQTEDAANFLIKQDQGRCKETLTMAIPYEDISFEKAEINDMAIDT------RPRLRRIL 231
                     ||.:|.....|.|: |:....:.|.:..|..| ..:|..:::      ||...:..
  Fly   236 ---------EDDSNPAPPLDSGK-KDAEPDSPPSKFHSIRK-RFDDDVVESKFSPVKRPTFSKSF 289

  Fly   232 -ELVVLLSENA-----KESTPTPSAIQQKKLDALLQSHETYLIPNSVKLLSKVQSISESSMQTAL 290
             :|.:.|:..|     ||..|..:..:.||.            |..|  .:|::.:.|   .|..
  Fly   290 GKLGIGLATKAEADIKKEPPPVDTKKEIKKK------------PEPV--AAKMEIVEE---PTVA 337

  Fly   291 ANRSKQISKELPHKANQS----EDNRKKEVKYLESENLSECLSKVKLSSYQQKNTDSSTLSGPRN 351
            |....:...|.||...:|    ||..:.|.   |.|:..:     .|.:|.|:            
  Fly   338 AGEKTKKEPEQPHVGAKSEPEVEDKPQPEA---EPEDEID-----PLDAYMQE------------ 382

  Fly   352 LASSSTNSNSNVRKSMTLF----KSSGAHLTTSLSVPLTENCTNQSNNRTVVFSMDKMEQIFNDM 412
                   .|:.:|:.....    ||.|..:.|.::...|   |.......:..:||.:|....|.
  Fly   383 -------VNNEMRRVNNFVNPPAKSQGVVILTGVAKKKT---TTLKKGEVIEQNMDSLEYSSEDE 437

  Fly   413 LG--KNPSERSVQKNRSQMPNSNVST--------------------TKRCVEKMHVCRSENMGDR 455
            |.  ::.:.....|:|.::...:.|:                    |...|||.   ||:..|.:
  Fly   438 LEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKY---RSDLEGIQ 499

  Fly   456 -KPSVCLKHLVLAHSPEPVNPVTSYKELPLGNTILNAMDDLNFQTPLPTQIYAWPHLVNRGSLVL 519
             |...|.|            |:.::.:..:....:..:..|.|:.|.|.|..|.|.:::...|:.
  Fly   500 VKGKGCPK------------PIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIG 552

  Fly   520 VNPSGTGRSWSYLPVICSSVLSSFENVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDF 584
            :..:|:|::.::       :|..|.::..........|.:||::..:.|...::........|..
  Fly   553 IAKTGSGKTLAF-------ILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSL 610

  Fly   585 NTQNLKVVNTHAHSMMDVYMMLLNSCGVLVTTLAHLNNIL-SNELPLVNPTRLEFIIFDDYDRKR 648
            ..:.:.|..  ...:.:....|.....::|.|...:.::| :|...:.|..|:.:::.|:.|  |
  Fly   611 GLRPVCVYG--GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD--R 671

  Fly   649 LDNAELLKEVFQKVNSIGGLSKQLVLVAQQWHSERFQKLLNRTTKPLILFGDFLEAALYGG---- 709
            :.:.....:|.:.::::.. .:|.|:.:..: ..:.:.|..|..|..|       ..:.||    
  Fly   672 MFDMGFEPQVMRIIDNVRP-DRQTVMFSATF-PRQMEALARRILKKPI-------EVIVGGRSVV 727

  Fly   710 ---LKFNVTLRSSALKARQLLDILA--EQDGSKKRTLIYCKNQMELEELSAILIEAGLQCVDISK 769
               ::.:|.:.:...|..:||::|.  ::.||   .:::...|...:.|...|::|...|:.:..
  Fly   728 CKEVEQHVVILNDDAKFFKLLELLGIYQEAGS---IIVFVDKQENADILLRDLMKASYPCMSLHG 789

  Fly   770 AQNQ-----------SPNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRR---------- 813
            ..:|           |....:|:..|...:.|.|:::.|::::.:|..:..:..|          
  Fly   790 GIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKK 854

  Fly   814 --FHTMADNIRNLFTKPIGRGQDLITYILMDENNAKEWPRIMKFLQDHGLTTQS 865
              .:|.....::.:...|.|..||...::..|..|. |.......:..|.|..:
  Fly   855 GSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL-WTEYKALQEAEGKTVHT 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_609335.3 TUDOR 15..115 CDD:425754 12/68 (18%)
DEAD-like_helicase_N 488..>646 CDD:475120 26/158 (16%)
TUDOR 930..1043 CDD:425754
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 26/135 (19%)
DEAD-like_helicase_N 454..899 CDD:475120 78/483 (16%)
KH-I_DDX46 1121..1223 CDD:411901
Blue background indicates that the domain is not in the aligned region.

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