DRSC/TRiP Functional Genomics Resources

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Protein Alignment SoYb and fs(1)Yb

DIOPT Version :9

Sequence 1:NP_001245959.1 Gene:SoYb / 34331 FlyBaseID:FBgn0051755 Length:1476 Species:Drosophila melanogaster
Sequence 2:NP_477494.2 Gene:fs(1)Yb / 31262 FlyBaseID:FBgn0000928 Length:1042 Species:Drosophila melanogaster


Alignment Length:1188 Identity:271/1188 - (22%)
Similarity:446/1188 - (37%) Gaps:328/1188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 WSPPK--------LVRGVVRRRQNEEYLVWILDYGFNLCCSVWDLWPLPDHLSRSLCDFKEGGVA 128
            ::.||        |...:.:|..|.|..:.|....|.           .:.|...|.: ::....
  Fly    23 YASPKSGAASLDFLAHTLRKREANTEKTILICQQNFE-----------AERLKFELAE-RDVNTI 75

  Fly   129 LIAPHSGSV------WSRSAIES----LDKQLE-----DANQLTFQVVHRGKSNRNFGLLKFRSS 178
            |:.||...|      ||:..|..    .|..||     :||    .|:|......|    ||   
  Fly    76 LLPPHGAMVGQVLLLWSKGYINQALILCDGMLEHLGVVEAN----LVIHTTLPELN----KF--- 129

  Fly   179 CQTEDAANFLIKQDQGRCKETLTMAIPYEDISFEKAEINDMAIDTRPRLRRILELVVLLSENAKE 243
               |:...:|                   .||...||              :|.:.....||.||
  Fly   130 ---EERLKWL-------------------SISARNAE--------------MLVITPCDEENEKE 158

  Fly   244 --STPTPSAIQQK---KLDALLQSHETYLIPNSVKLLSKVQSISESSMQTALANRSKQISKELPH 303
              ....|..:||:   |:|||          ||::|....::...:|.:...|.....:|...| 
  Fly   159 GKGETEPEIVQQRMPLKVDAL----------NSMQLYEIKENTPPTSSEDYKAEADVLLSAATP- 212

  Fly   304 KANQSEDNRKKEVKYLESENLSECLSKVK-LSSYQQKNTDSSTL--SGPRNLASSSTNSNSNVRK 365
             |....||:::|:      |||...:.|| |:|::..:|||:.:  |.|     ::...|:.|  
  Fly   213 -ATIPNDNKEQEI------NLSVEDATVKLLASFELGSTDSAAVDESSP-----AAAKFNAPV-- 263

  Fly   366 SMTLFKSSGAHLTTSLSVPLTENCTNQSNNRTVVFSMD----------KMEQIFNDMLGKNPSER 420
                           .|..:|||.|.         |:|          |::.:|.:|....|...
  Fly   264 ---------------YSPFVTENPTK---------SLDAEFQELVKSFKVQNVFKNMNLPPPPSV 304

  Fly   421 SVQKNRSQMPNSNVSTTKRCVEKMHVCRSENMGDRKPSVCL-----------KHLVLAHSPEPVN 474
            |:::   .:.:::.|..:..::...:.....:.|...|:.:           .:.||..|...|.
  Fly   305 SIEE---PVSSASASDYRHQIDTTSLDSIRTVKDSPASLAVVPFSAGGITYNNYGVLGWSRHAVV 366

  Fly   475 PVTSYKELPLGNTIL-NAMDDLNF--QTPLPTQIYAWPHLVNRGSLVLVNPSGTGRSWSYLPVIC 536
            |.....|.|..:||: .||..:..  ......|.:||||:....|:::|.....|::|||||.:|
  Fly   367 PCYGLTEAPDISTIIRRAMQQMGVARSRARAVQRFAWPHVSLGKSVLVVGNLQIGKTWSYLPTVC 431

  Fly   537 SSVLSSFENVTSNLDTRIAPGPLAILIVDSVENAKKLASHCEFLMKDF-NTQNLKVVNTH--AHS 598
            .   .|.|::....|  :..||..|.:..:....|::......|:... :....:.|.||  ...
  Fly   432 Q---RSHEDLQRRPD--VGRGPTCIFVCPNQGQGKQIERWMSTLLCLLGSASGFEDVVTHWDKTQ 491

  Fly   599 MMDVYMMLLNSCGVLVTTLAHLNNILSNELPLVNPTRLEFIIFDDYDRK--RLDN---------- 651
            ::|:...|....|:|:|::..|..:|::     ||..   .|||....|  .|||          
  Fly   492 LVDIVRRLKKPVGILLTSVDLLLQLLNH-----NPVG---SIFDAQAVKCIALDNLNDMVRVLPN 548

  Fly   652 -----AELLKEVFQKVNSIGGLSKQLVLVAQQWHSE-RFQKLLNRTTKPLILFGDFLEAALYGGL 710
                 .:.|.|:||...:    ..||::..:.||:: ..|.:|......|:||.|.|||::|||:
  Fly   549 DTMKLLQRLPEMFQLTQN----KCQLLVSGRIWHTDLMVQHILPLMPDVLVLFDDALEASVYGGV 609

  Fly   711 KFNV-TLRSSALKARQLLDILAE-QDGSKKRTLIYCKNQMEL----EELSAILIEAGLQCV---- 765
            :.:| .:.....|...|..::|| ::.:.:..::.|.|..|:    ..|.||.:.|.: ||    
  Fly   610 QLDVRVVADEPEKIEHLKALIAERRNFANEPAVMVCSNSTEVLLLRRSLQAIGVNAHI-CVSEAC 673

  Fly   766 --DISKAQNQSPNRLMLVDDSQVRKQLPVRNIQLLIHFSLPESWLRFSRRFHTMADNIRNLFTKP 828
              ::::...|||:.|:||.|..| .:|....|.||||:|....|.||..||.....|:::..|:|
  Fly   674 YSNVAEWLRQSPSGLLLVTDDVV-PRLKCGKIPLLIHYSFASMWARFKNRFSLFYANLKSPTTRP 737

  Fly   829 IGRGQDLITYILMDENNAKEWPRIMKFLQDH---------GLTTQSMPDSEQQLDNTLPYCPYKL 884
            :  ||.::.....|..|.  | ::..|...|         |:.:|...: ||....:|  |....
  Fly   738 V--GQSVVFAKPTDLENI--W-KLCDFYMKHKLPRPGHLLGILSQRRLE-EQPTSRSL--CHQMA 794

  Fly   885 SNGNCNRNQCNKRHHFLKTDL------PKIGNPLLQPGTLIRCKFLKAYDPAHMAVMPMKYKSKD 943
            :.|:|.|::|..||...:.::      ||.|        |||...|..|.||.:||.        
  Fly   795 AFGDCLRHKCMYRHVMWRDEVLPPDHYPKNG--------LIRFLVLVCYSPAALAVR-------- 843

  Fly   944 STIWIDVPYPSYPSTLVFKMS-----------FGVPRKVH-NPCKINDVCFVQHKELLSRVRIVD 996
                :...:|:....|.|.||           ....|.:| ||.. .::..|::.....||.||.
  Fly   844 ----LSDQFPTAIRFLNFPMSDLGERVQRHYELEANRHMHPNPVP-GEMAVVKNINRYERVHIVS 903

  Fly   997 NPARPQVTVQLMDYGTELLQVKASQLLECPEQFRDLQQLAMDIRLSGLAGSGQGGMWSTDS---- 1057
            ..:...|.|||:|..||....|.|||..|.:.|:|..:.|||:|:.||.......:|..|:    
  Fly   904 VESNVMVLVQLLDTSTECFSYKTSQLYSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLV 968

  Fly  1058 -----------------------------------------IQWVQDRFADINEEIMQITVDFGV 1081
                                                     :.:|.:||....:|..|:.:|..|
  Fly   969 RKDFFRRTHNKRNRQFHAVVQSAIHRTIFVRNIYDDEGNDLLSFVINRFRSHQDECCQLKLDAMV 1033

  Fly  1082 LDVAYVKEIALIEECPTM 1099
            :.         .::||.|
  Fly  1034 MS---------SKDCPYM 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SoYbNP_001245959.1 TUDOR 7..115 CDD:278965 8/50 (16%)
SrmB 475..877 CDD:223587 116/446 (26%)
P-loop_NTPase 480..>646 CDD:304359 43/171 (25%)
TUDOR 927..1043 CDD:278965 37/127 (29%)
fs(1)YbNP_477494.2 TUDOR <859..948 CDD:278965 28/89 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470065
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0334
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016799
OrthoInspector 1 1.000 - - otm26337
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22655
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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