DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and glpF

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_418362.1 Gene:glpF / 948422 ECOCYCID:EG10396 Length:281 Species:Escherichia coli


Alignment Length:264 Identity:66/264 - (25%)
Similarity:107/264 - (40%) Gaps:63/264 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ECLASF----MYVFIVCGAAAGVGV-GASVSSVLLATALASGLAMAT-LTQCFLHISGAHINPAV 129
            :|:|.|    :.:|...|..|.:.| |||.....::.....|:|||. ||   ..:||||:||||
E. coli    10 QCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLT---AGVSGAHLNPAV 71

  Fly   130 TLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGV----------TVPGYQGNLQAAISHSAAL 184
            |:||.:.......:...:|.:|..|....|||:||:          |....:|::: ::..:...
E. coli    72 TIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVE-SVDLAGTF 135

  Fly   185 AAW--------ERFGVEFILTFLVVLCYFVSTD--------PMKKFM-GNSAASIGCAYSACCFV 232
            :.:        :.|.||.::|.:::......||        |:...: |...|.||.:.......
E. coli   136 STYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGF 200

  Fly   233 SMPYLNPARSLGPSFVLNKWDSHW---------------VYWFGPLVGGMASGLVYEYIFNSRNR 282
            :|   ||||..||.  :..|.:.|               |..|||:||.:.....|..:..    
E. coli   201 AM---NPARDFGPK--VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIG---- 256

  Fly   283 NLRH 286
              ||
E. coli   257 --RH 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 63/249 (25%)
glpFNP_418362.1 GlpF 6..256 CDD:440345 64/254 (25%)

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