DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and NIP1;2

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_193626.1 Gene:NIP1;2 / 827626 AraportID:AT4G18910 Length:294 Species:Arabidopsis thaliana


Alignment Length:262 Identity:68/262 - (25%)
Similarity:118/262 - (45%) Gaps:20/262 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DSHGGGHGVNNRLSSTLQAPKRSMQAEIR--------TLEFWRSIISECLASFMYVFIVCGAAAG 88
            |:..|...||.:.....|..::::...::        ::.|.:.:::|.|.::..:|..| ||..
plant    10 DARDGAVVVNLKEEDEQQQQQQAIHKPLKKQDSLLSISVPFLQKLMAEVLGTYFLIFAGC-AAVA 73

  Fly    89 VGVGASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCG 153
            |......:..|...|:..||.:..|.....||||||.|||||:|..........:...|:.:|..
plant    74 VNTQHDKAVTLPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVI 138

  Fly   154 GGIAGAA---LLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKF 214
            |....||   ||:|:......|.....:....:.:..:.|.:|||:|| |:.:...|:||  .:.
plant   139 GSTLAAATLRLLFGLDQDVCSGKHDVFVGTLPSGSNLQSFVIEFIITFYLMFVISGVATD--NRA 201

  Fly   215 MGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYE 274
            :|..|. ::|........::.|.    :||.|||||:.|.:.:...|:|...|:||.::...||.
plant   202 IGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIVSPIVGAVSGAWVYN 266

  Fly   275 YI 276
            .:
plant   267 MV 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 61/231 (26%)
NIP1;2NP_193626.1 PLN00184 1..293 CDD:177778 68/262 (26%)

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