DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and NIP5;1

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_192776.1 Gene:NIP5;1 / 826630 AraportID:AT4G10380 Length:304 Species:Arabidopsis thaliana


Alignment Length:216 Identity:63/216 - (29%)
Similarity:102/216 - (47%) Gaps:18/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RSIISECLASFMYVFIVCGAAAGVGVGASV--SSVLLATALASGLAMATLTQCFLHISGAHINPA 128
            |.:.:|.:.:|:.:|.   |.||..|....  :..|:..|..:|||:..:.....||||||:||:
plant    78 RKLGAEFVGTFILIFT---ATAGPIVNQKYDGAETLIGNAACAGLAVMIIILSTGHISGAHLNPS 139

  Fly   129 VTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVE 193
            :|:|...:|.........||.||....|..:..|.||..|...|.:..     .:::..:.|.:|
plant   140 LTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVFHPFMSGGVTI-----PSVSLGQAFALE 199

  Fly   194 FILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMP----YLNPARSLGPSFVLNKW 252
            ||:|| |:.:...|:||  .:.:|..|. ::|........|:.|    .:||.|:|||:.....:
plant   200 FIITFILLFVVTAVATD--TRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNY 262

  Fly   253 DSHWVYWFGPLVGGMASGLVY 273
            .|.|||...|.:|.::...||
plant   263 RSLWVYLVAPTLGAISGAAVY 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 61/214 (29%)
NIP5;1NP_192776.1 PLN00026 29..304 CDD:177663 63/216 (29%)

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