DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and SIP2;1

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001190113.1 Gene:SIP2;1 / 824862 AraportID:AT3G56950 Length:260 Species:Arabidopsis thaliana


Alignment Length:236 Identity:52/236 - (22%)
Similarity:89/236 - (37%) Gaps:46/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IISECLASFMYVFIVCGAAAGVGVGASVSSVL----------LATALASGLAMATLTQCFLHISG 122
            ::::.:.|||:::      |||.|...|..||          :...|.|.::|...........|
plant     7 VVTDLVLSFMWIW------AGVLVNILVHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQQATKG 65

  Fly   123 AHINPAVTLALCVVRSISPIRAAMYI---TAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAAL 184
            ...||...||..|....|....::::   ....|..:|...:::.....|....|..||.|.|. 
plant    66 GLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGKGPKLNVAIHHGAL- 129

  Fly   185 AAWERFGVEFILTFLVVLCYFVSTDP------MKKFMGNSAA----SIGCAYSACCFVSMPYLNP 239
                   .|.||||.:||.....|..      ||.::|:.|.    .:|...:..|      :||
plant   130 -------TEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGC------MNP 181

  Fly   240 ARSLGPSFVLNKW---DSHWVYWFGPLVGGMASGLVYEYIF 277
            |..:|.::...:.   :...|||.||:...:.:...::.:|
plant   182 AAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVF 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 51/230 (22%)
SIP2;1NP_001190113.1 MIP 12..218 CDD:444743 51/225 (23%)

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