DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and TIP2

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_189283.1 Gene:TIP2 / 822259 AraportID:AT3G26520 Length:253 Species:Arabidopsis thaliana


Alignment Length:249 Identity:76/249 - (30%)
Similarity:121/249 - (48%) Gaps:38/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 MQAEIRTLEFWRSIISECLASFMYVFIVCGAAAGVGV------GASVSSVLLATALASGLAMATL 113
            :|.|:......|:.::|.:::.::||  .|:.:|:..      ||:..|.|:|.|||....:...
plant    11 VQEEVYHPNALRAALAEFISTLIFVF--AGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVA 73

  Fly   114 TQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLY----GVTVPGYQGNL 174
            .....:|||.|:|||||..:.:..:|:.:|..:|..||..|.:|...||.    |..:|.:  .|
plant    74 VSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAF--GL 136

  Fly   175 QAAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSA---------ASI--GCAYS 227
            .|.:....||.      .|.::|| ||...|..:.||....:|..|         |:|  |.|:|
plant   137 SAGVGSLNALV------FEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFS 195

  Fly   228 ACCFVSMPYLNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIFNSRN 281
            ...      :|||.:.||:.|...|.:|||||.|||:||..:|::|:::|...|
plant   196 GAS------MNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDEN 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 72/236 (31%)
TIP2NP_189283.1 PLN00027 1..253 CDD:177664 76/249 (31%)

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