DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and DELTA-TIP

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_188245.1 Gene:DELTA-TIP / 820870 AraportID:AT3G16240 Length:250 Species:Arabidopsis thaliana


Alignment Length:230 Identity:80/230 - (34%)
Similarity:113/230 - (49%) Gaps:30/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RSIISECLASFMYVFIVCGAAAGVGVGASVSSV----------LLATALASGLAMATLTQCFLHI 120
            |:.::|.:::.::||      ||||...:.:.:          |:|.|:..|.|:........:|
plant    19 RAYLAEFISTLLFVF------AGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANI 77

  Fly   121 SGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHS--AA 183
            ||.|:|||||..|.|...|:.|....|..||..|..|...||..||     |.| |..:||  |.
plant    78 SGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----GGL-AVPTHSVAAG 136

  Fly   184 LAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSA-ASIGCAYSACCFVSMPY----LNPARS 242
            |.:.|...:|.|:|| ||...|..:.||.|..:|..| .:||....|....:.|:    :|||||
plant   137 LGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARS 201

  Fly   243 LGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF 277
            .||:.....:..|||||.|||:||..:||:|..:|
plant   202 FGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVF 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 78/224 (35%)
DELTA-TIPNP_188245.1 MIP 1..244 CDD:444743 80/230 (35%)

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