DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and NIP2;1

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_180986.1 Gene:NIP2;1 / 818002 AraportID:AT2G34390 Length:288 Species:Arabidopsis thaliana


Alignment Length:277 Identity:68/277 - (24%)
Similarity:132/277 - (47%) Gaps:22/277 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 AMRKDSHGGGHGVNNRLSS----TLQAPK-RSMQAEIRTLEFWRSIISECLASFMYVFIVCGAAA 87
            ::.|.:||....:|.:.||    :|.:.| .|....:.::.|.:.:::|.:.::..:|..|   |
plant     5 SVSKSNHGNVVVLNIKASSLADTSLPSNKHESSSPPLLSVHFLQKLLAELVGTYYLIFAGC---A 66

  Fly    88 GVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITA 150
            .:.|.|..:.|  |:..|:..|:.:..|..|..|:| ||.||||||||...:.....:...|||.
plant    67 AIAVNAQHNHVVTLVGIAVVWGIVIMVLVYCLGHLS-AHFNPAVTLALASSQRFPLNQVPAYITV 130

  Fly   151 QCGGGIAGAA---LLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILT--FLVVLCYFV---- 206
            |..|....:|   ||:.:............:..|.:.:..:.|.:|||:|  .::|:|...    
plant   131 QVIGSTLASATLRLLFDLNNDVCSKKHDVFLGSSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKR 195

  Fly   207 STDPMKKFMGNSAASIGCAYSACCFVSMPYLNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGL 271
            :|:.::..:..:..::...::.  .||...:|||||:||:.|...:...|:|...|.:|.::..|
plant   196 TTEELEGLIIGATVTLNVIFAG--EVSGASMNPARSIGPALVWGCYKGIWIYLLAPTLGAVSGAL 258

  Fly   272 VYEYIFNSRNRNLRHNK 288
            :::.:.:.:|.....:|
plant   259 IHKMLPSIQNAEPEFSK 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 57/225 (25%)
NIP2;1NP_180986.1 MIP 6..283 CDD:444743 68/276 (25%)

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