DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and TIP4;1

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_180152.1 Gene:TIP4;1 / 817123 AraportID:AT2G25810 Length:249 Species:Arabidopsis thaliana


Alignment Length:238 Identity:79/238 - (33%)
Similarity:110/238 - (46%) Gaps:44/238 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RSIISECLASFMYVFIVCGAAAGVGVGASVSSV-------LLATALASGLAMATLTQCFLHISGA 123
            :::|.|.:.:|::||      ||||...:..|:       |.|.|:|....:|.:.... ||||.
plant    19 KALIVEFITTFLFVF------AGVGSAMATDSLVGNTLVGLFAVAVAHAFVVAVMISAG-HISGG 76

  Fly   124 HINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQG----NLQAAISHSAAL 184
            |:||||||.|.:...||..||.:|...|.....|...||..:|  |..|    .|.:.:|::..:
plant    77 HLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLT--GGMGTPVHTLASGVSYTQGI 139

  Fly   185 AAWERFGVEFILTF-LVVLCYFVSTDPMK-----------KFMGNSAASIGCAYSACCFVSMPYL 237
             .|     |.|||| |:...|....||.|           .|:..:....|.|:|...      :
plant   140 -IW-----EIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGAS------M 192

  Fly   238 NPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIFNSR 280
            |||||.||:.|...|..|||||.|||:||..:|.:||.:...|
plant   193 NPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLIDR 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 76/229 (33%)
TIP4;1NP_180152.1 MIP 1..234 CDD:444743 78/235 (33%)

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