DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and AT2G16835

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_179275.1 Gene:AT2G16835 / 816185 AraportID:AT2G16835 Length:65 Species:Arabidopsis thaliana


Alignment Length:83 Identity:20/83 - (24%)
Similarity:28/83 - (33%) Gaps:28/83 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 PVYGTRTNPTPMDGNHKYDR-RDPQQMYGVTGPRNRGQSAQSDDSSYGSYHGSAVTPPARHPSVE 599
            |:.||..||....|..:|:. :.|:..:   .||                  .|..||.....:.
plant     8 PITGTGINPAKSFGIARYNLVKFPRLAW---DPR------------------LANPPPTTRLELL 51

  Fly   600 PSPPPPPMLMYAPPPQPN 617
            ||.|.|      .||.|:
plant    52 PSSPAP------FPPTPS 63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651
AT2G16835NP_179275.1 MIP <1..23 CDD:294134 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152704at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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