DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and mindy4

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001072940.1 Gene:mindy4 / 780771 XenbaseID:XB-GENE-6456867 Length:746 Species:Xenopus tropicalis


Alignment Length:337 Identity:58/337 - (17%)
Similarity:105/337 - (31%) Gaps:103/337 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 QEPLYGGTRSLYCRSPTLTRSNLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSLYPMRT------ 438
            :|.|....||:..|:......:|:|   :| |.|....:          |.::|..:.|      
 Frog    31 EEELPRAPRSISTRNELRAALHLDR---LY-KENKLTEK----------PLKTLLEIMTKYFLEH 81

  Fly   439 --QQQQQQQQQQQQQVAPAPQSSHLQNQNVQNQMQQRSESIYGMRGSMRGQQQPIQQQQQQQ--- 498
              :.:....:.:|....|...:::||.::..:.|.    ::..:.....|:...:....:.:   
 Frog    82 SGKTKALNMRGEQNPAPPKGLATNLQQRHAGDLMM----AVCDVSDDETGESSAVSDTSKTEIYR 142

  Fly   499 QQQQLQ-------------QQQPNMGV------QQQQMQPPPQMMSDPQ---------------- 528
            .|..||             |:|...||      .:.::.||...:.:.|                
 Frog   143 SQNDLQFNKSNHLKGPDRKQKQTEAGVTSTGVCSEGELMPPRVNIREHQERESWEMALGAKSSRS 207

  Fly   529 --QQPQGFQPVYGTRTNPTPMDGNHKYDRRDPQQMYGVTGPRN-RGQSAQSDDSSYGSYHGSAVT 590
              |:|:..:.|.|..:.||.........:|.|::......|.. :|:.........|        
 Frog   208 ETQRPRSSRMVRGMMSGPTASSQEDSLKKRGPRRSAAANTPNPIKGEVLSEITGGMG-------- 264

  Fly   591 PPARHPSVEPSPPPPPMLMYAPPPQPNAA------HPQPIRTQSE--RKVS--APVVVSQPAACA 645
                    |||...|          .|.|      ....:.:.||  |.||  :...|.:|.|.|
 Frog   265 --------EPSTIAP----------ANTALKLGKEFAAKLLSTSENLRNVSLCSTNAVPKPNAFA 311

  Fly   646 VTYTTSQGSAVT 657
            ...|.:.|...|
 Frog   312 AAETAADGKGAT 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651
mindy4NP_001072940.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..179 8/55 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..254 9/55 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 319..342 2/5 (40%)
DUF4205 408..741 CDD:372796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2356
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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