DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and aqp3a

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_998633.1 Gene:aqp3a / 406777 ZFINID:ZDB-GENE-040426-2826 Length:296 Species:Danio rerio


Alignment Length:278 Identity:72/278 - (25%)
Similarity:108/278 - (38%) Gaps:53/278 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GGGHGVNNRLSSTLQAPKRSMQAEIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSVL 99
            |....|.::|:.|.|...:.:          |..::|||.:.:.|...||:.|.:.:......:.
Zfish     2 GWQKSVLDKLAQTFQIRNKLL----------RQGLAECLGTLILVMFGCGSLAQLKLSEGSHGLF 56

  Fly   100 LATALASGLAMATL--TQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALL 162
            |...||.|.. |||  ..|. .:||.|:|||||.|||::......:..:|...|..|...|||::
Zfish    57 LTANLAFGFG-ATLGILVCG-QVSGGHLNPAVTFALCLLGREKWRKFPVYFLFQTLGSFLGAAII 119

  Fly   163 ---YGVTVPGYQGNLQA-------------AISHSAALAAWERFGVEFILTFLVVLCYFVSTDP- 210
               |...:..|.|....             |...|..|.....|..:.|.|..:::|.....|| 
Zfish   120 FAEYHDAIYDYAGESNELLVLGEKETAGIFATYPSKYLTPLNGFFDQVIGTASLIVCILAIVDPY 184

  Fly   211 -------MKKF-MGNSAASIGCAYSACCFVSMPYLNPARSLGPSF--VLNKWDSHWV----YW-- 259
                   ::.| :|.|...||.:..   |.|...:||||..||..  .:..|.|...    ||  
Zfish   185 NNPIPQGLEAFTVGFSVLIIGLSMG---FNSGYAVNPARDFGPRLFTAMAGWGSEVFTARDYWFL 246

  Fly   260 ---FGPLVGGMASGLVYE 274
               |.|.:|.:...:||:
Zfish   247 VPIFAPFIGAVIGVIVYQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651 65/252 (26%)
aqp3aNP_998633.1 MIP 23..266 CDD:238204 67/247 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0580
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152704at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2356
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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