DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and Eglp3

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_611812.2 Gene:Eglp3 / 37738 FlyBaseID:FBgn0034884 Length:270 Species:Drosophila melanogaster


Alignment Length:234 Identity:69/234 - (29%)
Similarity:107/234 - (45%) Gaps:33/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RSIIS----ECLASFMYVFIVCGAAAGVGVGASVSSVL----LATALASGLAMATLTQCFLHISG 122
            ||.|:    |..|:.::|||.|       :|...:.:.    ..:.|..|||:....|||..:||
  Fly    24 RSAIACFFGELAATAVFVFIAC-------MGCVETPLFQNSHFRSGLTFGLAILIAIQCFGSVSG 81

  Fly   123 AHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISH------- 180
            ||:|||:|||..:..:|..|||..|..||..|.:.|    ||:.|....||....:.:       
  Fly    82 AHLNPAITLAAWLYGAIGWIRAIAYFVAQAAGALIG----YGLLVAVLPGNSIKGVDNPSGVCVT 142

  Fly   181 --SAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGNS-----AASIGCAYSACCFVSMPYLN 238
              :..::..:...:||::|..:|:......||....:.:|     ..::.|........:...:|
  Fly   143 ILAPGISVLQGVFIEFLITCCLVMVACSVWDPRNAKLQDSVPVRFGLTVSCLILTAGLFTGASMN 207

  Fly   239 PARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF 277
            |.|||||:...:.|..||:||.||||.|..:.|:|...|
  Fly   208 PTRSLGPAVWNDSWAHHWIYWVGPLVAGAVTSLIYRMAF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 67/228 (29%)
Eglp3NP_611812.2 MIP 30..244 CDD:444743 65/224 (29%)

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