DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and Mindy4

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001136253.1 Gene:Mindy4 / 330323 MGIID:3583959 Length:744 Species:Mus musculus


Alignment Length:191 Identity:39/191 - (20%)
Similarity:76/191 - (39%) Gaps:30/191 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 GQMPGVVANAGQGNY-CQNLYTAPPLSSK------YDQQQEPL-----YGGTRSL-YCRSPTLTR 399
            |.|.|.||::.|.:: .::|..:..||.|      ..||.||.     |.|.:.: ...|.:::|
Mouse   211 GMMAGPVASSPQDSFRKRSLRRSSALSRKLQTPEEIQQQSEPFVHTPAYLGPQEVPDSSSDSVSR 275

  Fly   400 SNLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSLYPMRTQQQQQQQQQQQQQVAPAPQSSHLQNQ 464
            |.|.:           :|...:.:|.....:|.|     .|:.:.:.:...:.:|...|....|.
Mouse   276 SPLGQ-----------LNELSIEKPNVTSSSQGL-----SQRDRPRLRSVSEDSPLGYSHTEGNS 324

  Fly   465 NVQNQMQQRSESIYGMR-GSMRGQQQPIQQQQQQQQQQQLQQQQPNMGVQQQQMQPPPQMM 524
            .:.....:|:....|:: .|:|..|....:...:....||:..:..:..:...:.|||.|:
Mouse   325 RMAQDQLERAFKRQGVQPPSLRKNQLVSDRTDDKPDALQLEDVEDELIKEDIVLFPPPSML 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651
Mindy4NP_001136253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..358 33/162 (20%)
DUF4205 403..739 CDD:290609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2356
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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