DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and Mip

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001099189.1 Gene:Mip / 25480 RGDID:3090 Length:263 Species:Rattus norvegicus


Alignment Length:253 Identity:97/253 - (38%)
Similarity:140/253 - (55%) Gaps:23/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV-----LLATALASGLAMATLTQCF 117
            |:|:..|||:|.:|..|:..|||.        |:|:|:...     :|..|||.|||:|||.|..
  Rat     3 ELRSASFWRAIFAEFFATLFYVFF--------GLGSSLRWAPGPLHVLQVALAFGLALATLVQTV 59

  Fly   118 LHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSA 182
            .||||||:|||||.|..|...:|.:||..||.||..|.:||||:||.||.|..:|||.....| |
  Rat    60 GHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH-A 123

  Fly   183 ALAAWERFGVEFILTFLVVLCYFVSTDPMKK-FMGNSAASIGCAYSACCFVSMPY----LNPARS 242
            .::..:...||..||...|||.|.:.|..:. .||:.|.::|.:.:......|.|    :|||||
  Rat   124 GVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVALAVGFSLTLGHLFGMYYTGAGMNPARS 188

  Fly   243 LGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIFNSRNRNLRHN----KGSIDNDSS 296
            ..|:.:...:.:|||||.||::||....|:|:::...|.:::...    ||:..:||:
  Rat   189 FAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDFLLFPRLKSVSERLSILKGARPSDSN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 91/224 (41%)
MipNP_001099189.1 MIP 3..219 CDD:395174 91/224 (41%)
NPA 1. /evidence=ECO:0000250|UniProtKB:P06624 68..70 1/1 (100%)
NPA 2. /evidence=ECO:0000250|UniProtKB:P06624 184..186 1/1 (100%)
Interaction with CALM. /evidence=ECO:0000250|UniProtKB:P06624 227..237 0/9 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..263 2/7 (29%)

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