DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bib and aqp-4

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_505512.3 Gene:aqp-4 / 179366 WormBaseID:WBGene00000172 Length:273 Species:Caenorhabditis elegans


Alignment Length:275 Identity:78/275 - (28%)
Similarity:119/275 - (43%) Gaps:52/275 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GGHGVNNRLSSTLQAPKRSMQAEIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV-- 98
            |.....||.||.....|          |:  |::::|:|.|:      |....|.||...:|:  
 Worm    23 GQPATTNRKSSYTSRKK----------EY--SLLTKCVAEFL------GDLTFVYVGTMQASLFQ 69

  Fly    99 ----LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGA 159
                :|..|.|.|..:..|...|.||||.|.||||:.|:.....:.......|:.:|..|||.||
 Worm    70 YADGILHAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQLLGGICGA 134

  Fly   160 ALLYGVTVPGYQGNLQAAISHSAALAA----WERFGVEFILTFLVV---LCYFVSTDPMKKFMGN 217
            .|...|.   .|..|.:..:.:..|:.    |:....|.::||.:|   |.....||.:..    
 Worm   135 FLTAAVL---SQEQLTSCEAGATLLSPGSQWWQGLIAETVVTFFLVHTILITAADTDTVTL---- 192

  Fly   218 SAASIGCAYS----ACCFVSMPYLNPARSLGPS-----FVLNK----WDSHWVYWFGPLVGGMAS 269
            :..:||...|    :...::...:|||||||||     |...|    |::|::||.|||:|...:
 Worm   193 APLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYWAGPLLGSTIA 257

  Fly   270 GLVYEYIFNSRNRNL 284
            ..:|: :|.||...:
 Worm   258 LCIYK-LFESREERI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651 68/240 (28%)
aqp-4NP_505512.3 MIP 46..264 CDD:238204 67/231 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I3512
eggNOG 1 0.900 - - E1_COG0580
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152704at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2356
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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