DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and Aqp4

DIOPT Version :10

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001304658.1 Gene:Aqp4 / 11829 MGIID:107387 Length:352 Species:Mus musculus


Alignment Length:292 Identity:100/292 - (34%)
Similarity:155/292 - (53%) Gaps:36/292 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 TLEFWRSIISECLASFMYVFIVCGAAAGVGVGAS-----VSSVLLATALASGLAMATLTQCFLHI 120
            |..||:::.:|.||:.  :|::.|..:.:..|.|     |..||:  :|..||::||:.|||.||
Mouse    31 TQAFWKAVSAEFLATL--IFVLLGVGSTINWGGSENPLPVDMVLI--SLCFGLSIATMVQCFGHI 91

  Fly   121 SGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALA 185
            ||.|||||||:|:...|.||..::..||.|||.|.|.||.:||.||.|...|.|.....| ..|.
Mouse    92 SGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVH-GNLT 155

  Fly   186 AWERFGVEFILTFLVVLCYFVSTDPMK-KFMGNSAASIGCAYSACCFVSMPY----LNPARSLGP 245
            |.....||.|:||.:|...|.|.|..: ...|:.|.:||.:.:.....::.|    :|||||.||
Mouse   156 AGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGP 220

  Fly   246 SFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF-----------NSRNRNLRHNKGS---IDNDSS 296
            :.::..|.:||:||.||::|.:.:|.:|||:|           .:.::..:..|||   ::::.|
Mouse   221 AVIMGNWANHWIYWVGPIMGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSYMEVEDNRS 285

  Fly   297 SIHSEDEL-------NYDMDMEKPNKYQQSQG 321
            .:.:||.:       ..|:|..:..|.:.|.|
Mouse   286 QVETEDLILKPGVVHVIDIDRGEEKKGKDSSG 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:395174 85/221 (38%)
Aqp4NP_001304658.1 MIP 31..248 CDD:395174 85/221 (38%)

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