DRSC/TRiP Functional Genomics Resources

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Protein Alignment bib and mindy4

DIOPT Version :9

Sequence 1:NP_001260313.1 Gene:bib / 34330 FlyBaseID:FBgn0000180 Length:737 Species:Drosophila melanogaster
Sequence 2:XP_002663449.3 Gene:mindy4 / 100537560 ZFINID:ZDB-GENE-110411-104 Length:683 Species:Danio rerio


Alignment Length:244 Identity:40/244 - (16%)
Similarity:92/244 - (37%) Gaps:49/244 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 GPLVGGMASGLVYEYIFNSRNRNLRHNKGSIDND----SSSIHSEDELNYDMDME---KPNKYQQ 318
            |..|..:::.||.||:  || :.|:.....:|.:    .||:::..:|...:.:|   |.||.::
Zfish     3 GKDVEDVSASLVREYL--SR-KGLKKTIACMDEELPRTHSSVNNRSDLRSILHLEGLYKKNKAEE 64

  Fly   319 ---------------SQGTYPRGQSNGNGGGQAAGNGQHQAANMGQMPGVVANAGQGNYCQNLYT 368
                           |:|    |::.|:..|....:...|..:...:..........:...||.:
Zfish    65 HPLKSMLEMIVKDRMSEG----GKTKGHRQGDVQAHALDQTMSSSSIDMTETIKRDESCLHNLSS 125

  Fly   369 APPLSSKYDQQQEPLYGGTRSLYCRSPTLTRSNLNRSQSVYAKSNTAINRDIVPRPGPLVPAQSL 433
            ..|..|:..:..:.:...      ::|:..|.:         |:.|:::.....|...|..::..
Zfish   126 NNPRLSESSRVSQVIVSP------QTPSEKRQD---------KAKTSLDLSSSSRDSLLTMSKEG 175

  Fly   434 Y-----PMRTQQQQQQQQQQQQQVAPAPQSSHLQNQNVQNQMQQRSESI 477
            :     .:.|..|:.:..:.::.:...|..|..|..|.:...::.:.|:
Zfish   176 FLSETKVLDTDSQKNRGSRIRRGIMAGPICSSSQESNRRRPTRKTASSV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bibNP_001260313.1 MIP 58..273 CDD:278651 3/11 (27%)
mindy4XP_002663449.3 DUF4205 337..678 CDD:290609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2356
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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