DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL13 and RpL13

DIOPT Version :10

Sequence 1:NP_523530.1 Gene:RpL13 / 34329 FlyBaseID:FBgn0011272 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_321255.2 Gene:RpL13 / 1281310 VectorBaseID:AGAMI1_000327 Length:217 Species:Anopheles gambiae


Alignment Length:218 Identity:139/218 - (63%)
Similarity:172/218 - (78%) Gaps:2/218 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRY 65
            |.|||:||.|.|:||:||||::|||||||||.||..||:|||||||||||.|.:||:|.||:.||
Mosquito     1 MVKGNHMISNGHFHKYWQRHIRTWFNQPARKYRRRQNRIKKAKAVFPRPAKGPIRPIVHCPSQRY 65

  Fly    66 HTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPIN- 129
            :||:||||||||.||||||:...||:|||||||.||:|||:||||.|:|||||||||||||||: 
Mosquito    66 NTKIRAGRGFTLAELKGAGLTKKFAQTIGIAVDPRRQNKSVESRQENVQRLKEYRSKLILFPIHR 130

  Fly   130 EKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGI 194
            .||.|.||::.:|||||.|:|..|:||:|.:|.|. ...:|:.:|||.||..||:||.:||..|.
Mosquito   131 NKKPRKGEATADECKLAKQMKRTVMPIRNTRPKVT-LEPITEAQKKFNAFQALRQARLNARFFGA 194

  Fly   195 RAKRAKEAAESEDAAKGDPKKAK 217
            |||:||:|||:|:...|..|..|
Mosquito   195 RAKKAKDAAENENNQPGAGKGKK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL13NP_523530.1 Ribosomal_L13e 7..187 CDD:460150 119/180 (66%)
RpL13XP_321255.2 Ribosomal_L13e 7..186 CDD:460150 118/179 (66%)

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