DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL13 and Rpl13-ps6

DIOPT Version :10

Sequence 1:NP_523530.1 Gene:RpL13 / 34329 FlyBaseID:FBgn0011272 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_036019379.1 Gene:Rpl13-ps6 / 100040416 MGIID:3642685 Length:211 Species:Mus musculus


Alignment Length:205 Identity:130/205 - (63%)
Similarity:159/205 - (77%) Gaps:7/205 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKL 69
            |.||...|:||.||:.|.|||||||||:||...|..||:::.||||||.:||:|||||:|||||:
Mouse     6 NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARSIAPRPASGPIRPIVRCPTVRYHTKV 70

  Fly    70 RAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIR 134
            ||||||:||||:.|||....|:||||:||.||:|||.||.|.|:||||||||||||||......:
Mouse    71 RAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPK 135

  Fly   135 AGESSLEECKLATQLKGPVLPIKN---EQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIRA 196
            .|:||.||.||||||.|||:||:|   ::.|    |.:|::||.|||||:||.||::|||.||||
Mouse   136 KGDSSAEELKLATQLTGPVMPIRNVYKKEKA----RVITEEEKNFKAFASLRMARSNARLFGIRA 196

  Fly   197 KRAKEAAESE 206
            ||||||||.:
Mouse   197 KRAKEAAEQD 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL13NP_523530.1 Ribosomal_L13e 7..187 CDD:460150 113/182 (62%)
Rpl13-ps6XP_036019379.1 Ribosomal_L13e 8..187 CDD:460150 113/182 (62%)

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