DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and AT1G18560

DIOPT Version :10

Sequence 1:NP_523529.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_001319034.1 Gene:AT1G18560 / 838437 AraportID:AT1G18560 Length:690 Species:Arabidopsis thaliana


Alignment Length:219 Identity:45/219 - (20%)
Similarity:78/219 - (35%) Gaps:62/219 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FAVSDELLGTV-----APIVVY-----------WL-----YSGIYVALSSLESYRL-HSKVEEEE 47
            ||..||::..:     |.::|.           |:     ..|....:.:..||.: ..:...::
plant   201 FATVDEIVHAILDNYEADMIVQTNEDREEQNCNWVNEVIRCEGRGTTICNSPSYMIVRPRTARKD 265

  Fly    48 KNLVSKSSV-VKGVLVQQVVQAVVAILLFTVTGSDAEADKAQQ-----FSFLVLARQFV----TA 102
            ..|::|... :..|..|..:|.:|.:.        .|:...:|     ||:....||:.    .|
plant   266 PTLLTKEETEMPKVWAQICLQRMVDLA--------KESTTLRQILDPMFSYFNSRRQWTPPNGLA 322

  Fly   103 MIVLDTWQYFMHRYMHQNKFL---YKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGALSFLV 164
            ||||....|.|.....|...|   .:|:.::|           :.|.|.....:..:.|.|:.|:
plant   323 MIVLSDAVYLMETSGSQQLVLSTVVRHLDNKH-----------VANDPELKAYIIQVAGCLAKLI 376

  Fly   165 SGMSPRTSIFFFSFATIKTVDDHC 188
                 |||.:   ...|..|:|.|
plant   377 -----RTSSY---LRDISFVNDLC 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_523529.1 zf-BED 35..84 CDD:427043 8/50 (16%)
AT1G18560NP_001319034.1 ZnF_BED 56..99 CDD:214746
DUF4413 429..515 CDD:433913
Dimer_Tnp_hAT 569..649 CDD:399013
Blue background indicates that the domain is not in the aligned region.

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