DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and zbed1

DIOPT Version :10

Sequence 1:NP_523529.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_004911791.1 Gene:zbed1 / 733978 XenbaseID:XB-GENE-6084277 Length:693 Species:Xenopus tropicalis


Alignment Length:775 Identity:150/775 - (19%)
Similarity:270/775 - (34%) Gaps:244/775 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PKMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKVLTNHGNTTNLRAHLQHRHKDLFKELCQEHD 95
            |:.||..|:||||.:|....::..:.:.|..|...:...|||:||..||:..|.|   |.|    
 Frog    19 PRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPD---EYC---- 76

  Fly    96 IHVPPRKTPRNVSHPPLSKRNVSSRRVKLEFINNRNHDNASDDELDEAAVATAAMQAEEDASSQT 160
                                         ||:.       |:.|....|.|||..:.:.: |||.
 Frog    77 -----------------------------EFVK-------SNTEQMREAFATAFSKLKPE-SSQQ 104

  Fly   161 MLYETMVPFTYDEAENLVEEEERLVMEPKYGRKRKVATPSSALMHGRVIKHEEGGYAAVANIANL 225
            ::.||::.......||                |:.:...||.:   .:|.  ||.|.        
 Frog   105 VVQETLIMKNTQSFEN----------------KKHLELTSSVI---SLIC--EGMYP-------- 140

  Fly   226 AEALTDIVIKD-LRNVDSLYDAGFGEFLRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGEITRD 289
            |..|.:...|: |:..:..|:....:::     .|..:||.:   :.|.||          :.:|
 Frog   141 ASILDEPTFKNLLKTAEPRYEVPMRKYI-----CSRVLPEKY---NAIREM----------VLKD 187

  Fly   290 FTSEKPFSLAFEMWVNVEQRR-FLSIFHHFL----------------------DEETHSVRGMLY 331
            .|......::.:||.:|.|.| ::::..:|:                      :.:..::..:||
 Frog   188 LTDILWCGISTDMWKSVTQNRSYVTLSVYFMSTGPSNCLSVNSRCLKTFEVPEENKAETITRVLY 252

  Fly   332 AT-VEYNDYIVFDDLLTDF---YLANCTLAIINYDEEEDLLHTYLREKNIPISL-CYVSVIDKCL 391
            .| :|:..........|||   .:..|:|.                  :||:.: |.....|..:
 Frog   253 ETFIEWGISAKVFGATTDFSKDIVKACSLL------------------DIPVDMPCLGQTFDMGI 299

  Fly   392 RRVFEIEEVATLLEQVKDLMQRHSTEIASKVSEVPMPTYNEHFPWTLYETLKFFAESISW----- 451
            ::.|::.::::||.:.:.|::.......:.............||..|      .::.:||     
 Frog   300 QQAFQLPKLSSLLSRCRKLVEYFQQSSIAMYMLCEKQKQQNLFPCML------ISDRVSWWGSTL 358

  Fly   452 -----------------SEDMD--HLVISA----------------KTVTEALSALVIALDTLRG 481
                             .||.:  ||::.|                |.|.|.||.          
 Frog   359 VMLQRLKEQQFTIAGVLVEDSNNHHLMLEASEWNTIEGLVDLLQPFKQVAEMLSV---------- 413

  Fly   482 EDIPLCSMLSPITSKILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDN----LTAAALLDPR 542
            ...|..||:.|:...:|...|.|.|.|...:...|..|:.||.:.......    |..|..||||
 Frog   414 SKYPTISMVKPLLHMLLNTSLNIKETDPKEISMAKEVIAKVLSSTYQQTPEIDMFLNVATFLDPR 478

  Fly   543 FHRLTTIDNLERTV---RMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEP---RVVDGSAPKK 601
            :.:|..:...||..   |::......    :.:|:.| :.....|..|..||   ::...:.|..
 Frog   479 YKKLPFLSAFERAQVENRVIEEAKCF----IDKGKEN-IKNEEKVFIISEEPPMKKMASSTPPPT 538

  Fly   602 LGLKLLFDSNEIPNPPKRDAD---SSVESDLKRYRNEVVVQLDESPIEWWLKMGHIYGTLRDLAS 663
            ..:..:.......:....|.:   :.|..:|..::::.|:.|:|.|::||          .|..:
 Frog   539 SSINSMLAEIFCQSGSSEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWW----------SDRLT 593

  Fly   664 LYHSVPGVV--------TLSFKKALRDQIYDFN--------KRFMLTGSHIDAILFLHHH 707
            |:..:|.|:        |..|.:.|      ||        ||..|..:|:|..:||:.:
 Frog   594 LFPLLPKVLQKYWCIRPTRVFPERL------FNSSANVVNSKRNRLAPAHVDEQIFLYEN 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_523529.1 zf-BED 35..84 CDD:427043 16/48 (33%)
zbed1XP_004911791.1 zf-BED 23..72 CDD:427043 16/48 (33%)
DUF4413 412..514 CDD:433913 26/116 (22%)
Dimer_Tnp_hAT 568..647 CDD:399013 23/94 (24%)

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