DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and Zfp618

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_008762033.1 Gene:Zfp618 / 313253 RGDID:1310743 Length:976 Species:Rattus norvegicus


Alignment Length:708 Identity:137/708 - (19%)
Similarity:242/708 - (34%) Gaps:184/708 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 PPR------KTPRNVSHPPLSK----RNVSSRRVKLEFINNRNHDNASDDELDEAA--------- 144
            ||.      :||.:.|  |.||    .|..||||:.:..|:....|.|....:|.|         
  Rat   346 PPATQTQTFRTPNSGS--PASKATAAENTFSRRVESKAQNHFEETNRSSQNSNETASPLISNPFP 408

  Fly   145 -------VATAAMQAEEDASSQTMLYETMVPFTYDEAENLVEEEER----LVME---PKYGRKRK 195
                   .....:|.:    ..:.|.|.|.....|...|:...:.|    .|.|   |:..|...
  Rat   409 LLQKPYTCGACGIQFQ----FYSNLLEHMQSHAADNENNITSNQSRSPPAAVEEKWKPQAQRNSA 469

  Fly   196 VATPSSALMHGRVIKHEEGGYAAVANIANLAEALTDIVIKD------------LRNVDSLYDAG- 247
            ..|.:|:|....||..:|.        .|:||.|..::..|            |:...:|.|:| 
  Rat   470 NNTTTSSLTPNSVIPEKER--------QNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGA 526

  Fly   248 -FGEF-LRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGE-------ITRDFTSEKPFSLAFEMW 303
             :|.| :.::|||...:...| :..:.|::.......:|.       :|....|..|.|......
  Rat   527 RYGAFSVTEILGNFNTLALKH-LPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTA 590

  Fly   304 VNVEQRRFLS---------------IFHHFLDEETHSVRGMLYATVEYNDYIVFDDLLTDFYLAN 353
            ...|.....|               :.||:       |:.:|      :::::.:  :...|:.:
  Rat   591 YQAEGNHIKSYVLGVKGADIRDSGDLVHHW-------VQNVL------SEFVMSE--IRTVYVTD 640

  Fly   354 CTLAIINYDEEEDLLHTYLREKNIPISLCYV-----SVIDKCLRRVFEIEEVATLLEQVKDLMQR 413
            |.::...:.:....|.         .|.|.:     ||:.|...:...:.||..||...:||  .
  Rat   641 CRVSTSAFSKAGMCLR---------CSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDL--A 694

  Fly   414 HSTEIASKV-----SEVPMPTYNEHFPWTL--YETLKFFAESISWSEDMD-------HLVISAKT 464
            .||.:|.:.     ...|.|.:|......|  :|..:...|..|.::.|:       ||:.:...
  Rat   695 GSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAA 759

  Fly   465 VTEALSALVIALDTLRGEDIPLCSMLSPITSKILIKKLGIAEQDDP--------LMMNLKRTISS 521
            :...:...||.|.   .|..|...::.||  .:.::||..|:.:|.        |.:...:....
  Rat   760 ILTPVKQAVIELS---NESQPTLQLVLPI--YVRLEKLFTAKANDAGTVSKLCHLFLEALKENFK 819

  Fly   522 VLQAHVISNDNLTAAALLDPRFHRLTTIDNLERTVRMLTHKYNIN-----FGGVGEGESNEVAAT 581
            |..||.:       |.:|||: .:|       |.|....|:..|:     ...|.|..:.|....
  Rat   820 VHPAHKV-------AMILDPQ-QKL-------RPVPPYQHEEIISKVCELINEVKESWAEEADFE 869

  Fly   582 SSVVAIKSEPRVVDGSAPKKLGLKLLFDSNEIPNPPKRDADSSVESDLKRYRNEVVVQLDESPIE 646
            .|.    .:.|...|.                 :|..::.|...::::..|..|.:.|......:
  Rat   870 PSA----KKARSATGE-----------------HPTAQEDDRLGKNEVYDYLQEPLFQATPDLFQ 913

  Fly   647 WWLKMGHIYGTLRDLASLYHSVPGVVTLSFKKALRDQIYDFNKRFMLTGSHIDAILFL 704
            :|..:...:..|..||....:||.|...|....:.:|.....:|.:|:...::.::||
  Rat   914 YWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFL 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
Zfp618XP_008762033.1 C2H2 Zn finger 148..168 CDD:275368
C2H2 Zn finger 189..209 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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