DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dref and Zbed4

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_852077.1 Gene:Zbed4 / 223773 MGIID:2682302 Length:1168 Species:Mus musculus


Alignment Length:705 Identity:141/705 - (20%)
Similarity:250/705 - (35%) Gaps:203/705 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KMKSVYWRYFGFPSNDNNEVITKQNVVCIKCHKVL------TNHGNTTNLRAHLQHRHKDLFKEL 90
            |..|..|.:|...|.|:.:      |||:.|.:.:      ||.|.:..|| |||..|..:.|  
Mouse   557 KKTSKLWNHFSICSADSTK------VVCLHCGRTISRGKKPTNLGTSCLLR-HLQRFHGHVLK-- 612

  Fly    91 CQEHDIHVPPRKTPRNVSHPPLSKRNVSSRRVKLEFINNRNHDNASDDELDEAAVA--TAAMQAE 153
                          .:||...||:.....|.:.:|.....:..::::...|...||  ..::.||
Mouse   613 --------------NDVSEATLSRSPGIRRPLGIELSGPSSFRDSTEKFYDSHPVAKKITSLIAE 663

  Fly   154 EDASSQTMLYETMVPFTYDEAENLVEEE--ERLV--MEPKYGRKRKVATPSSALMHGRVIKHEEG 214
                   |:...:.|:      :||:..  .||:  ::|:|    .:.:||              
Mouse   664 -------MIALDLQPY------SLVDNVGFNRLLEYLKPQY----SLPSPS-------------- 697

  Fly   215 GYAAVANIANLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGNS---------------AAMPE 264
             |.:...|..:.:.:..|::..|:..:|    |...|...:..:|               |:...
Mouse   698 -YFSRTAIPGMYDNVKQIIMSHLKEAES----GVVHFTSGIWMSSQTREYLTLTAHWVTFASAVR 757

  Fly   265 PHKIDSLINEMHASKFLEIGEITRDFTS---EKPFSLAFEMWVNVEQRRFLSIFHHFLDEETHSV 326
            ||     ..:.|.|..|::.:|..|::.   :|.....:|.||.                   |:
Mouse   758 PH-----CEDHHCSALLDVSQIDCDYSGNSIQKQLECWWEAWVT-------------------SI 798

  Fly   327 RGMLYATVEYNDYIVFDDLLTDFYLANCTLAIINYDEEEDLLHTYLREKNIPISLCYVSVIDKCL 391
            ...:..||            ||    |.::..:..:.|...:..:....|:     .||...|..
Mouse   799 GLQIGITV------------TD----NPSIGKMLSEGEHSSVQCFSHTVNL-----IVSEAIKSQ 842

  Fly   392 RRVFEIEEVATLL-----------EQVKDLMQRHSTEIASKVSEVPMP-TYNEHFPWTLYETLKF 444
            |.|..:..:|..|           |::.:|.:.:.......:.:||.. :.:.|....|.|..:.
Mouse   843 RMVQNLLSIARKLCERVHRSPRAREKLAELQKEYELPQHQLIQDVPSKWSTSFHMLERLIEQKRA 907

  Fly   445 ---------FAESIS---WS--EDMDHLVISAKTVTEALSALVIALDTLRGEDIPLCSMLSPITS 495
                     |.|.||   |.  :.:.|::......:..:||.:..|..:    ||:..:||....
Mouse   908 VNEVSIECNFRELISCDQWEVMQSVCHVLRPFDAASREMSAHMSTLSQV----IPMIHILSRKVE 968

  Fly   496 KILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDNLTAAALLDPRFH-RLTTIDNLERTVRML 559
            .:..:.:||    |.::.:||..::|.|.| .:.:.....|.|||||:. .|.|.:..|:..:.|
Mouse   969 MLFGETMGI----DTMLKSLKEAMASRLSA-TLHDPRYIFATLLDPRYKASLFTEEEAEQYRQDL 1028

  Fly   560 THKYNINFGGVGEGESNEVAATSSVVAIKSEPRVVDGSAPKKLGLKLLFDSNEIPNPPKRDADSS 624
            ..:..|      ...::|..|||:        ....||..|..|.:   :|.....|.|||....
Mouse  1029 IRELEI------LNSTSEDTATSN--------GCDSGSPLKDTGTE---ESLWSLAPIKRDQREK 1076

  Fly   625 VESDL-KRYRNEVVVQLDESPIEWW-LKMGHIYGTLRDLASLYHSVPGVVTLSFK 677
            :..|: ..|..|.|::....|:.:| ||..              |.||:.||:.:
Mouse  1077 LPEDMVLAYLEEEVLEHSCDPLTYWNLKRS--------------SWPGLSTLAVR 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965 17/54 (31%)
Zbed4NP_852077.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..55
zf-BED 118..165 CDD:335142
zf-BED 289..335 CDD:335142
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..443
zf-BED 460..506 CDD:335142
zf-BED 561..607 CDD:335142 16/52 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1040..1059 7/26 (27%)
Required for homodimerization and nuclear accumulation. /evidence=ECO:0000250|UniProtKB:O75132 1083..1168 12/49 (24%)
Dimer_Tnp_hAT 1085..>1134 CDD:368565 12/47 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.