DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and C10A4.1

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_001359820.1 Gene:C10A4.1 / 182482 WormBaseID:WBGene00015662 Length:532 Species:Caenorhabditis elegans


Alignment Length:566 Identity:108/566 - (19%)
Similarity:198/566 - (34%) Gaps:164/566 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ANLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGN----SAAMPEPHKIDSLINEMHASKFLEI 283
            |.:..|:|.::..||.::.::...||...:..:..|    |........:.:|.:|..|      
 Worm    13 AKIHRAITSMIAIDLMSLTTVEKPGFKNLIATLRPNFKLKSRWSITREDLPNLYDEYKA------ 71

  Fly   284 GEITRDFTSEKPFSLAFEMWVNVEQRRFLS-IFHHFL--DEETHSVRGMLYAT----VEYNDYIV 341
             ::..:..|.....|.|::|.:...:..:: :..:||  :|..|.|.|:|...    ...|..:.
 Worm    72 -KLEDELLSVDHAVLGFDLWSDEGSKHEVNGVIVYFLQNNEVVHRVLGVLNCRESKHTAQNIALG 135

  Fly   342 FDDLLTDFYLAN-----CTLAIINYDEEEDL------------LHTYLRE--KNI----PISLCY 383
            ..:|::::.:..     |.....|.....||            ||....:  ||:    .:.|.|
 Worm   136 LKELISEYKIEGKIVCMCRDGGSNVQNACDLLKCESFDCLSHKLHLAANDATKNMVGVGRVLLLY 200

  Fly   384 VSVIDKCLR-----RVFE-IEEVATL----LEQ----------------------VKDLMQRHST 416
            ..::.|..:     :.|| |:||..|    |::                      ::.||:.::|
 Worm   201 KKLVRKLKKSTVTAKQFESIQEVLELPVLCLQKSSSVRWSHMKLMFDRALIRKSAIEKLMETNNT 265

  Fly   417 EIASKVSEVPMPTYNEHFPWTLYETLKFFAESISWSEDMDHLVISAKTVTEALSALVIALDTLRG 481
                    :|..|.|:   |.:.:.:......|.        :.|.||...         :|...
 Worm   266 --------LPQLTEND---WNVIQNVSDVFTPID--------LFSKKTQDR---------ETPAS 302

  Fly   482 EDIPLCSMLSPITSKILIKKLGIAEQDDPLMMNLKR-TISSVLQAHVISNDNLTAAALLDPRFHR 545
            :.||||..|.....:.:.........:|.:...||: :....||          .|.|||||:..
 Worm   303 QVIPLCYALIDHCKESIDHPEAFKAIEDRMQKELKKYSACRYLQ----------FATLLDPRYKD 357

  Fly   546 LTTIDNLERTVRMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEPRVVDG------SAPKKLGL 604
            ....|..:       |.:...|....|   ::|..||.     :|.|::|.      .||.| ..
 Worm   358 HFCTDEFK-------HMFIEEFEKCNE---DDVYITSD-----NEVRLLDSHSDSSDEAPAK-NA 406

  Fly   605 KLLFDS------NEIPNP-PKRDADSSVESDLKRYRNEVVVQLDESPIEWWLK--MGHIYGTLRD 660
            |..|:.      :|.|.| |..|...:...:::||.:..|.|:  :|.::|..  ...:|..|..
 Worm   407 KFDFEKFIEKRISEQPKPIPNCDNSLTARMEVQRYLSTSVEQV--NPRQFWTSRVTTSVYPRLCK 469

  Fly   661 LASLY-------------HSVPGVVTLSFKKALRDQIYDFNKRFML 693
            .|:.:             .|..||:...|:|:|      :::.|.|
 Worm   470 FAARFIICPSGSAEVERVFSTAGVILNKFRKSL------YSEHFKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
C10A4.1NP_001359820.1 Dimer_Tnp_hAT 437..517 CDD:368565 17/81 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46169
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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