DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and C53D6.6

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_501570.1 Gene:C53D6.6 / 177720 WormBaseID:WBGene00008283 Length:615 Species:Caenorhabditis elegans


Alignment Length:640 Identity:127/640 - (19%)
Similarity:247/640 - (38%) Gaps:132/640 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 DEAAVATAAMQAEEDASSQTMLYETMVPFTYDEAENLVEEEERLVMEPKYGRKRKVATPSSALMH 205
            |...|....::.::.:|:..:||....    :..:.|:|....|.::|.  :|||:..      .
 Worm    28 DNKTVCGHPIKKQKKSSTSGILYHLRA----NHPDTLLEIGGSLEVQPL--KKRKLGE------E 80

  Fly   206 GRVIKHEEGGYAAVANIA-------NLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGNSAAMP 263
            .|:.:::.|......|..       .:.:||.:::..|...:.:|...|...||.:|.  ...:|
 Worm    81 WRIPENKSGTEGDFINWTAEDFEEKRINDALINMICLDAMPLSTLERPGIQHFLNEVC--PTFVP 143

  Fly   264 E-PHKIDSLINEMHASKFLEIGEITRDFTSEKPFSLAFEMWVNVEQRR---FLSIFHHFLDEETH 324
            : .::::.:::.:|   |.....:..:..:.:...|....| |.:.|:   .:.|..||::.:..
 Worm   144 KGKNQMNVMVHSLH---FKYEQRLREELRNVEYVGLGCYSW-NKDDRKNEQVVGISCHFMNSDGS 204

  Fly   325 SVRGMLYATVEYNDYIVFDDL--------LTDFY-LANCTLAIINYDEEEDLLHTYLREKNI--- 377
            .|...|.| :..:|.....:|        :||:| :.|..:|:|........|...|.|.:|   
 Worm   205 IVTRFLDA-IHISDPHEDPELEIENAIKSITDYYSIGNKVVAMIKDGVSNLKLSAQLLEFDIYDC 268

  Fly   378 ---PISLCYVS----------VIDKCLRRVFEIEEVATL-LEQVKDLMQRHSTEI--ASKVSEVP 426
               .:||..:|          :|:||.:.|.:|.|.|.. ...:.:.|...|.::  :.|::.:.
 Worm   269 TWNSLSLASISGINTIPGGTELIEKCKKIVQKINESAVYETSLIGEYMTIDSADLVKSGKLNWIT 333

  Fly   427 MPTYNEHFPWTLYETLKFFAES-----ISWSEDMDHLVISAKTVTEALSALVIALDTLRGEDIPL 486
            :.:..|.|. .|...|..|..:     :.:.:|.|.:.|..:|    ||.|..|:|..:.....:
 Worm   334 VVSMFEQFT-KLKGLLDTFLMNDMEGLMLYQQDYDLMEIILRT----LSPLKTAVDFGKQHTFRI 393

  Fly   487 CSMLSPITSKILIKKLGIAEQDDPLMMNLKRTISSVLQAHVISNDNLTAAALLDPRFHRLTTIDN 551
            .:::|.|::  ||.|.. ||....:...:|.|:...|:.: :....|..|.::|||...|.    
 Worm   394 SAIISLISA--LISKYS-AEHSYDMCKAIKLTLEEELKRY-LQIPTLLFATVIDPRVKLLL---- 450

  Fly   552 LERTVRMLTHKYNINFGGVGEGESNEVAATSSVVAIKSEPRVVDGSAPKKLGLKLLFDSN----- 611
            |..|.:.:..|           :..::|..     |::...|.|.:.......|....||     
 Worm   451 LPATAKEIVQK-----------KLEKIAQN-----IRNAEDVKDVAITHNQHCKTDVQSNYDLFA 499

  Fly   612 ------------------EIPNPPKRDADSSVESDLKRYRNEVVVQLDESPIEWWLKMGH--IYG 656
                              ||.:|     .:..:::|:|:.:|..:..:| ||.:|.|..:  .|.
 Worm   500 ELFKKLHGENYQNSCKEGEIVSP-----QAMAKTELERWISEPNIAFEE-PIVFWQKAENRTRYP 558

  Fly   657 TLRDLASLYHSVPGVV----TLSFKKALRDQIYDFNKRFMLTGSHIDAILFLHHH 707
            .|..|:|:...:||.:    .|:..|.|.     |..:..........|||||.:
 Worm   559 LLFQLSSIVLCLPGALLNTENLTSAKNLL-----FEHQIGCEDQTNQKILFLHQN 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
C53D6.6NP_501570.1 Dimer_Tnp_hAT 529..609 CDD:368565 23/86 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46169
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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