DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and LOC108644464

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_017945219.2 Gene:LOC108644464 / 108644464 -ID:- Length:501 Species:Xenopus tropicalis


Alignment Length:534 Identity:100/534 - (18%)
Similarity:190/534 - (35%) Gaps:134/534 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 VDSLYDAGFGEFLRQVLG-----------NSAAMPEPHKIDSLINEMHASKFLEIGEITRDFTSE 293
            ::::...||.:.:: |||           :..|:|.       :.:.|.:|      :..|..:.
 Frog     4 LNTIEKVGFKQMIK-VLGPRYVLTSRNYFSRTAIPN-------LYQQHRAK------VEADLATV 54

  Fly   294 KPFSLAFEMWVNVEQRRFLSIFHHFLDEE----THSVR---------GMLYATVEYNDYIVFDDL 345
            :.||...::|.:.....:||:..||:.::    :|.::         |.|.||       ...:.
 Frog    55 RHFSATTDLWSSRSMEPYLSLTVHFISDDWVLHSHCLQTSFFPDDHTGELLAT-------GLQEA 112

  Fly   346 LTDFYLANCTLAIINYDEEEDL-----LHTYLREKNIPISLCYVSVIDKCLRRVFEIEEVATLLE 405
            |..:.|....|..|..|...::     |:.:.|.:      |:...:...:....:.:.:...:.
 Frog   113 LGSWGLLEHRLVAITTDNGANIIKAVDLNNWTRFQ------CFGHRLHLAIETAMKDDRIQRAVG 171

  Fly   406 QVKDLMQRHS------TEIASKVSEVPMP----TYNEHFPW--------TLYETLKFFAESISWS 452
            ..|.::...|      .|:|...:|:.:|    |......|        .:.|..:...:.::..
 Frog   172 VCKKIVAAFSYSWKKRREMAKVQNELGLPKHQLTTETPTRWGSRQMMIQRVLEQERGINQLLTAD 236

  Fly   453 EDMDHLVIS------AKTVTEALSALVIALDTLRGEDIPLCSMLSPITSKILIKKLGIAEQDD-- 509
            :...||::.      .:.|.:.||.|....|.|.||.....|.:.|:..  |.....:||:||  
 Frog   237 KRSRHLILRWQDVEVLEAVNKGLSPLQDFTDALSGEHYVSVSYVKPVLH--LFNTTILAEEDDNT 299

  Fly   510 PLMMNLKRTISSVLQ---AHVISNDNLTAAALLDPRFHRLTTIDNLERTVRMLTHKYNINFGGVG 571
            .|..::||.|.:.|.   ::..::|.|...:.|||||.  ||....|....:|:.... ....:.
 Frog   300 ELTRDVKRNILAYLNEKYSNADTDDLLDITSFLDPRFR--TTYTKKENVEHVLSRAME-EIKCLK 361

  Fly   572 EGESNEVAATSSVVAIKSEPRVVDGSAP----KKLGLKLLFDSNEIPNPPKRDADSS-------- 624
            :.:.:.:...|...|..:.|     :||    :|..|...|         |:.:.||        
 Frog   362 DQQQDPLPGPSGAAAAAAGP-----AAPPEEKRKKSLSSFF---------KKQSTSSMGCSGETL 412

  Fly   625 -----VESDLKRYRNEVVVQLDESPIEWWLKMGHIYGTLRDLASLYHSVPGVVTLSFKKALRDQI 684
                 ::.||:.|.....|..|..|::||......:..:..||..|..:|.....|         
 Frog   413 SEEENIKMDLRAYLQTTEVDSDADPLKWWRCYQANFPRVAKLAQQYLCIPATSAPS--------- 468

  Fly   685 YDFNKRFMLTGSHI 698
                :|...||.:|
 Frog   469 ----ERVFSTGGNI 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
LOC108644464XP_017945219.2 Dimer_Tnp_hAT 421..501 CDD:399013 17/71 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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