DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and LOC108180016

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_021323503.1 Gene:LOC108180016 / 108180016 -ID:- Length:579 Species:Danio rerio


Alignment Length:600 Identity:108/600 - (18%)
Similarity:226/600 - (37%) Gaps:123/600 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 AENLVEE--EERLVMEPKYGRKRKVATPSSALMHGRVIKHEEGGYAAVANIANLAEALTDIVIKD 236
            ||.:|:.  :|....:..||       |||  ...:.|.|                |:...:.||
Zfish    30 AEAIVQPTVQEAFQRQASYG-------PSS--HRAKEINH----------------AIAYCIAKD 69

  Fly   237 LRNVDSLYDAGFGEFLRQVLGNSAAMPEP-HKIDSLINEMHASKFLEIGEITRDFTSEKP----- 295
            :..:.::...||.:.::..:        | :|:.|       .||....|:.:.:.|.|.     
Zfish    70 MIPIYTVAKPGFLKLMKTTV--------PLYKVPS-------QKFFSKTELPKMYNSLKEDVGKR 119

  Fly   296 ------FSLAFEMWVNV--EQRRFLSIFHHFLDE---ETHSVRGMLYATVEYNDYI--VFDDLLT 347
                  ::...::|.:.  ....::|...|:|.:   :::.:....:......|.|  .||::|.
Zfish   120 IAQGKWYAATTDLWTSSGGSGHPYISFTIHYLTDWKLQSNCLETQFFPEDHTADNISEFFDNMLQ 184

  Fly   348 DFYLANCTLAIINYDEEEDLLHTYLREKNIPISL--CYVSVIDKCLRRVFEIEEVATLLEQVKDL 410
            ::.:.......|..|...::...:  |...|...  |:...::..:.:..:|:.|.|.:...:.|
Zfish   185 EWGINKEFFVSITTDNATNMKKAF--ETTFPGQWFGCFGHNLNLAISKALKIQRVDTAVRSCRHL 247

  Fly   411 MQ------RHSTEIASKVSEVPMP----TYNEHFPW-TLYETLKFFAESI------------SW- 451
            :|      :...|:.:|...:.:|    .::....| :..:.|:.|.|..            :| 
Zfish   248 VQGFSRSWKRRRELRNKQEALNVPQRSLIHDVVTRWGSTQKMLQRFIEQQQAVCAVLATERGAWH 312

  Fly   452 --SEDMDHLVISAKTVTEALSALVIALDTLRGEDIPLCSMLSPITSKILIKKLGIAEQDDPLMMN 514
              .:|.|..||  :.|.:.|..|....|.|..|.....|.|.|:.|.|:...|.:..:|..|.::
Zfish   313 LIPKDADIAVI--EQVLQILQPLSAFTDALASESRVSLSALRPVLSHIISDILEVKNEDSALTID 375

  Fly   515 LKRTISSVLQAH--VISNDNLTAAALLDPRFHRLTTIDNLERTVRMLTHKYN--INFGGVGEGES 575
            |||.:.|.|::.  |.:...:...:.:|||| :.:..|:|:.||.....:.:  .....:.||.:
Zfish   376 LKRVMKSDLESRYSVDAKKVMDLTSFIDPRF-KGSFSDDLDATVNCCIEEASKLAEMTTLSEGAA 439

  Fly   576 NEVAATSSVVAIKSEPRVVDGSAPKKLGLKLLFDSNEIPNPPKRDAD---------SSVESDLKR 631
            ....::|:.:..............:.|...|    |:|.:..::.|:         |..|:::|.
Zfish   440 QTEQSSSTPMPFTHTHTPTSEKQQQSLATLL----NKITSTRQQRAEEQEGEGSMKSKTEAEIKL 500

  Fly   632 YRNEVVVQLDESPIEWWLKMGHIYGTLRDLASLYHSVPGVVTLSFKKALRDQIYDFN------KR 690
            |.:..:::.:..|::||.........|..||..:..:|.....|      ::::..:      :|
Zfish   501 YLSLPLIKSEADPLQWWSLHAEELPHLATLAEKFLCIPATSVPS------ERVFSASGHILSPQR 559

  Fly   691 FMLTGSHIDAILFLH 705
            ..|....::.:.|||
Zfish   560 SKLKPEKVNMLTFLH 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
LOC108180016XP_021323503.1 DUF659 95..241 CDD:309874 23/154 (15%)
Dimer_Tnp_hAT 497..577 CDD:310361 14/83 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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