DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dref and si:ch211-152f22.4

DIOPT Version :9

Sequence 1:NP_001260311.1 Gene:Dref / 34328 FlyBaseID:FBgn0015664 Length:709 Species:Drosophila melanogaster
Sequence 2:XP_021336075.1 Gene:si:ch211-152f22.4 / 101884418 ZFINID:ZDB-GENE-130603-60 Length:532 Species:Danio rerio


Alignment Length:598 Identity:108/598 - (18%)
Similarity:205/598 - (34%) Gaps:152/598 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 SQTMLYETMVPFTYDEAENLVEEEERLVMEPKYGRK-RKVATPSSALMHGRVIKHEEGGYAAVAN 221
            |:....:...|..|....|...:..|..:   :||. .:|.|...|..|   |:.|   :.....
Zfish    34 SRNKFMQLPYPRVYKPERNHTSDRGRKFL---HGRPFLRVQTNQQAQPH---IQQE---FPTNKG 89

  Fly   222 IANLAEALTDIVIKDLRNVDSLYDAGFGEFLRQVLGNSAAMPEPHKIDSLINEMHASKFLEIGEI 286
            :.:..:.|.:|:||||:.:.|:              |..|......|...:...:.:|.:   |:
Zfish    90 LGSGIKKLLNIIIKDLQPLSSV--------------NIEAPLSQSSIRCELQSFYRTKRV---EV 137

  Fly   287 TRDFTSEKPFSLAFEMWVNVEQRRFLSIFHHFLDEETHSVRGMLYATVEYNDYI----------- 340
            .|.........|:.|:|.:.:...:|::..|.::|..           |...|:           
Zfish   138 QRSVNKAHNLVLSAELWSSNKNTFYLTVAGHLINENW-----------ELKSYVLDTAHLIHKST 191

  Fly   341 ---VFDDLLTDFYLANCT----LAIINYDEEEDLLHTYLREKNIPISLCYVSVIDKCLRRVF--- 395
               |.:.||......|.|    ..:.|.|..:...:...:...||   |:...:||.:|...   
Zfish   192 AESVVEQLLRISKEWNITEKTQFVVTNVDGIKRAQNNIRKWTFIP---CFAFTLDKVVRETLSDW 253

  Fly   396 -----EIEEVATLLEQVKDL---MQRHSTEIASKVSEVPMPTYNEHFPW--TLYETLKFFAESIS 450
                 :.:::.....|..:.   :|:|...:..:..|:   |.:....|  |.|           
Zfish   254 ELLLRKCQQIVAFFHQSDEASQHLQKHRISLKLQSREL---TQSSGLKWLPTFY----------- 304

  Fly   451 WSEDMDHLVISAKTVTEALSALVIALDTLRGEDIPLCSMLSPITSKI---LIKKLGIAEQDDPLM 512
                      ..||:.|...|:   .:....:.:.||  |:....||   ::|.|.:        
Zfish   305 ----------MLKTILEQWPAI---FEVFVDKRVDLC--LNENERKIVDQIVKVLDV-------- 346

  Fly   513 MNLKRTISSVLQAHVISNDN-LTAAALLDPRFHRLTTIDNLERTVRMLTHKYNINFGGVGE---- 572
              ||.....|.:...||..| :....:|..|...|..::|  |..:.|:.|.:.:.|.:.:    
Zfish   347 --LKEATLKVGRQGFISISNIIPVVQMLQERLRNLGMMEN--RIAQKLSEKCDYHIGKINQILWF 407

  Fly   573 --------GESNEVAATSSVVAIKSEPRVVDGSAPKKLGLKLLFDSNEIPNPPKRDADSSVESDL 629
                    .....|...||:..:|:|.:            :.:.:|..:.:..:.|     ||.|
Zfish   408 RVCTALDPQYKTSVLRDSSIEDVKAEIK------------RQMRESKSVCHKSRSD-----ESVL 455

  Fly   630 KRYRNEVVVQLDESPIEWWLKMGHIYGTLRDLASLYHSVPG-VVTLSFKKALRD-QIYDFNKRFM 692
            ..|..  :..:..|.:|:|..:...:..|..:|....||.. |:.:.....::: ||  .|:|..
Zfish   456 LNYWE--MKDISGSTLEFWRNLPEEFRKLSSVARKNLSVVSTVIPMENVHQMKESQI--INRRNC 516

  Fly   693 LTGSHIDAILFLH 705
            |...:::.||||:
Zfish   517 LEPENLNMILFLN 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DrefNP_001260311.1 zf-BED 35..84 CDD:280965
si:ch211-152f22.4XP_021336075.1 Dimer_Tnp_hAT <469..532 CDD:310361 16/63 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1121
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223749at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46169
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.970

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