DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5850 and AT3G05940

DIOPT Version :10

Sequence 1:NP_001260310.1 Gene:CG5850 / 34327 FlyBaseID:FBgn0032172 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_187245.2 Gene:AT3G05940 / 819764 AraportID:AT3G05940 Length:422 Species:Arabidopsis thaliana


Alignment Length:383 Identity:119/383 - (31%)
Similarity:213/383 - (55%) Gaps:44/383 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LILIGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHSIYVDS 115
            ||::..|..:.|:.::::||.:|::::|:||.|::|:||::|||:|||.:::.|..||.|||.:|
plant     9 LIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALVLPKSSIYFNS 73

  Fly   116 LRECYEAYVIYNFMVYLLNYLNLGMDLEATMEYKPQVPHFFPL-CCMRPWVMGREFIHNCKHGIL 179
            :||.|||:|||||:...|.::.....:..::..:...|.:..: ||:.|..:...||..||.|.|
plant    74 IREVYEAWVIYNFLSLCLAWVGGPGSVVISLTGRSLKPSWHLMTCCIPPLPLDGRFIRRCKQGCL 138

  Fly   180 QYTVVRPITTFISVICELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRANKEDLKPM 244
            |:.:::||...::::....|.|.:|.|:.:.::.|:.::..||..||:|.|||||.|.|:.|:|.
plant   139 QFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIYTISYTVALYALVLFYVACKDLLQPF 203

  Fly   245 KPIPKFLCIKAVVFFSFFQGVLLNVLVYYNIIKDIFGSDVGDTNLASLLQNFLICIEMFIAAVAH 309
            .|:|||:.||:|||.:::||||:.:......|:        |...|:|.|||:||:||.|||.||
plant   204 NPVPKFVIIKSVVFLTYWQGVLVFLFAKSGFIR--------DEEEAALFQNFIICVEMLIAAAAH 260

  Fly   310 IYSFPHHPFHINSPQYWNNPNHSWCRAFLSMMD----ISDMQEDV------TEHLGVV------G 358
            .|:||:        :.:...|....|:|...:.    ::|...|.      |.|..|:      |
plant   261 FYAFPY--------KEYAEANVGGARSFSGSLAHALMLNDFYHDTVHQFAPTYHDYVLYNHNDGG 317

  Fly   359 SSLSRRFQGRSTYQPLARSPRRSSSESEYLISKRQDQQLPGNSSQSAGVADDGNSSNS 416
            ...:|:::.| |:.|..:.          :.:.|:::.:.||......|:...:.:::
plant   318 EEGTRKYRAR-TFVPTGQE----------MDAVRKNKHMFGNKIDGVSVSSQSSETST 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5850NP_001260310.1 Solute_trans_a 51..318 CDD:460991 102/267 (38%)
AT3G05940NP_187245.2 Solute_trans_a 9..269 CDD:460991 102/275 (37%)

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