DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5850 and tmem184a

DIOPT Version :10

Sequence 1:NP_001260310.1 Gene:CG5850 / 34327 FlyBaseID:FBgn0032172 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_998685.2 Gene:tmem184a / 406841 ZFINID:ZDB-GENE-040426-2925 Length:420 Species:Danio rerio


Alignment Length:368 Identity:124/368 - (33%)
Similarity:200/368 - (54%) Gaps:28/368 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NDQLIL-------IGGLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLF 105
            :||:.|       :.|:||.||:.::...|..|:..:|.|..|::|||||::|||||.::|:.|.
Zfish    51 DDQIFLSTATAQALSGIFVWSALILTCHQIYLHLRSYTVPNEQRYIIRILFIVPIYAFDSWLSLL 115

  Fly   106 F---PKHSIYVDSLRECYEAYVIYNFMVYLLNYLNLGMDLEATMEYKP-QVPHFFPLCCMRPWVM 166
            |   .::.:|.||:|:||||:|||||:.....||.....:.:.:..|| |....:..||:.....
Zfish   116 FITNDQYYVYFDSVRDCYEAFVIYNFLSLSFEYLGGESAIMSEIRGKPIQSSCLYGTCCLVGMSY 180

  Fly   167 GREFIHNCKHGILQYTVVRPITTFISVICELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLV 231
            ...|:..||...||:.||:||...|:::.:..|.|.:|:|.....:.||.::.|.|..:|:|.|.
Zfish   181 SIGFLRFCKQATLQFCVVKPIMAVITILLQAFGKYHDGDFNVTGGYLYITIIYNFSVSLALYALF 245

  Fly   232 LFYRANKEDLKPMKPIPKFLCIKAVVFFSFFQGVLLNVLVYYNIIKD---IFGSDVGDTNLASLL 293
            |||.|..:.|:|.:|:.|||.||:|:|.||:||::|.:|....:|.:   |.|.:||...:|:..
Zfish   246 LFYFATSDLLRPFEPVLKFLTIKSVIFLSFWQGMVLAILERCGVIPEAQFIDGHEVGAGTVAAGW 310

  Fly   294 QNFLICIEMFIAAVAHIYSFPHHPFHINSPQYWNN--PNHSWCRAFLSMMDISDMQEDVTEHLGV 356
            |||:||||||.|::|..|:|....:.....:...|  |.|.........::..||.:|...:.  
Zfish   311 QNFIICIEMFFASIALRYAFTSSVYREKKNEAPENVAPMHGISSGLKETINPGDMVQDAIHNF-- 373

  Fly   357 VGSSLSRRFQGRST---YQPLAR-SPRRSSSESEYLISKRQDQ 395
              |...:::..:||   .||.|. .|..|:|:|    :|:.|:
Zfish   374 --SPAYQQYTQQSTQEVVQPSANGKPGISTSKS----TKKSDK 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5850NP_001260310.1 Solute_trans_a 51..318 CDD:460991 104/280 (37%)
tmem184aNP_998685.2 Solute_trans_a 61..335 CDD:460991 103/273 (38%)

Return to query results.
Submit another query.