DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5850 and Tmem184b

DIOPT Version :9

Sequence 1:NP_001260310.1 Gene:CG5850 / 34327 FlyBaseID:FBgn0032172 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_006242075.1 Gene:Tmem184b / 362959 RGDID:1306591 Length:414 Species:Rattus norvegicus


Alignment Length:368 Identity:115/368 - (31%)
Similarity:191/368 - (51%) Gaps:41/368 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GLFVLSAVPVSIWHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFF---PKHSIYVDSLR 117
            |.||.:|:.::...|..|:..:::|..|:||:|||::|||||.::|:.|.|   .::.:|..::|
  Rat    51 GFFVWTALLITCHQIYMHLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVR 115

  Fly   118 ECYEAYVIYNFMVYLLNYLN---------LGMDLEATMEYKPQVPHFFPLCCM--RPWVMGREFI 171
            :||||:|||||:.....||.         .|..:|::..|        ..||:  :.:.:|  |:
  Rat   116 DCYEAFVIYNFLSLCYEYLGGESAIMSEIRGKAIESSCMY--------GTCCLWGKTYSIG--FL 170

  Fly   172 HNCKHGILQYTVVRPITTFISVICELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRA 236
            ..||...||:.||:|:....:||.:..|.|.:|:|.....:.|:.::.|||..:|:|.|.|||.|
  Rat   171 RFCKQATLQFCVVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFA 235

  Fly   237 NKEDLKPMKPIPKFLCIKAVVFFSFFQGVLLNVLVYYNIIKDIFGS--DVGDTNLASLLQNFLIC 299
            .:|.|.|..|:.||..:|:|:|.||:||:||.:|.....|..|..:  .||:..:|:..|:|:||
  Rat   236 TRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKINSARVSVGEGTVAAGYQDFIIC 300

  Fly   300 IEMFIAAVAHIYSFPHHPF-----HINSPQYWN----NPNHSWCRAFLSMMDISDMQEDVTEHLG 355
            ||||.||:|..::|.:..:     ....|.|..    .|..|...:....|:..|:.:|...:. 
  Rat   301 IEMFFAALALRHAFTYKVYADKRLDAQVPTYGPYGRCAPMKSISSSLKETMNPHDIVQDAIHNF- 364

  Fly   356 VVGSSLSRRFQGRSTYQ--PLARSPRRSSSESEYLISKRQDQQ 396
               |...:::..:||.:  |..|....|.|.|..|...|.:::
  Rat   365 ---SPAYQQYTQQSTLEPGPTWRGGTHSLSRSHSLSGARDNEK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5850NP_001260310.1 Solute_trans_a 51..317 CDD:281602 98/276 (36%)
Tmem184bXP_006242075.1 Solute_trans_a 46..317 CDD:397604 98/275 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D411703at33208
OrthoFinder 1 1.000 - - FOG0000529
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100407
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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