DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5850 and LOC3290539

DIOPT Version :10

Sequence 1:NP_001260310.1 Gene:CG5850 / 34327 FlyBaseID:FBgn0032172 Length:608 Species:Drosophila melanogaster
Sequence 2:XP_550843.3 Gene:LOC3290539 / 3290539 VectorBaseID:AGAMI1_004973 Length:312 Species:Anopheles gambiae


Alignment Length:278 Identity:59/278 - (21%)
Similarity:111/278 - (39%) Gaps:30/278 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ILIGGLFVLSAVPVSI-WHIIQHVIHFTKPILQKHIIRILWMVPIYALNAWIGLFFPKHSIYVDS 115
            |:|....:||....|| :....|::|.|....:...|.:|.:.|:..|...:.:..|:.....|:
Mosquito    44 IIIAATVLLSIGTFSIFFKNAYHILHRTPKQFKTKSILLLTIYPLITLFGVVSVSVPRAFFLCDT 108

  Fly   116 LRECYEAYVIYNFMVYLLNYLNLGMD--LEAT--MEYKPQVPHFFPLCCMRPWVMGREFIHN--- 173
            :...|.....|.|....:.|:: |.|  :::|  ..:..:.|   ||||..|.........|   
Mosquito   109 VMHVYFMICAYVFFSLCMQYVD-GEDALIKSTDSQTFSLRTP---PLCCFVPLFKRAPVTKNRLR 169

  Fly   174 -CKHGILQYTVVRPITTFISVICELCGVYGEGEFAGNVAFPYIVVVNNISQFVAMYCLVLFYRAN 237
             .:..|:|..||:     .::...|..|:.|.....|....|.|.:..||..:.::.|.:..|..
Mosquito   170 FVRMLIMQLPVVQ-----TALFLALNVVFVENYPNFNRIILYFVPMIVISILLGVWGLNILVRML 229

  Fly   238 KEDLKPMKPIPKFLCIKAVVFFSFFQGVLLNVLVYYNIIKDIFGSDVGDTNLASLLQNFL----I 298
            ......:|.:.|:..::||:.....|.:::..:|..:|      ||....|...:.:|.:    :
Mosquito   230 APLYSDLKLMGKYFVLQAVLILCRIQPLIIAAIVSSSI------SDCAFPNTLQVQKNAIFQLCL 288

  Fly   299 CIEMFIAA--VAHIYSFP 314
            |.||.:.:  .:.:|..|
Mosquito   289 CFEMMVLSCWASLLYKSP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5850NP_001260310.1 Solute_trans_a 51..318 CDD:460991 59/278 (21%)
LOC3290539XP_550843.3 None

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