DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4709 and zgpa-1

DIOPT Version :10

Sequence 1:NP_609331.1 Gene:CG4709 / 34324 FlyBaseID:FBgn0032169 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_501296.1 Gene:zgpa-1 / 177568 WormBaseID:WBGene00016383 Length:432 Species:Caenorhabditis elegans


Alignment Length:517 Identity:115/517 - (22%)
Similarity:217/517 - (41%) Gaps:99/517 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEYEAQLLVVEQALENAADDAQRQDLLALKNNLQELLAL-------TRESGDEAPIDELPQQGD 58
            :|..:.|:..:::.:....::..|.:....|.:|:||::|       |::|.|:..|||..:...
 Worm     4 LENLKDQIKRIDEMIVQETNEETRVEYEQTKMDLEELVSLMEEDEEKTQKSPDDDEIDEQDEDSA 68

  Fly    59 NLDDELQRLKSELNDLEAAGSSQTALDEERQLADLRTKYTAMVGEKCSAPHEHSWGTCYHNALIC 123
            .:||                                |...:::|.:|..|::.......|.|:|.
 Worm    69 EIDD--------------------------------TSTDSLLGSRCMVPYDSDRSLSLHTAIIM 101

  Fly   124 GVDDEVVMNSEGVLDARLRVLFTNPTHREMLPCSYYLEGECRFDEAKCRFSHGALVTGSSIRKYN 188
            .::.          ..|:||||::||...|.||:::|...|:|:| .||||||..|....|:.|.
 Worm   102 EIES----------SKRVRVLFSHPTCSAMKPCTHFLSSSCKFNE-NCRFSHGYSVELERIQDYQ 155

  Fly   189 PPDFHKLSRSRPVFALLPDRLWHRGRVLCVNFVEQICRVRLDGQDHKERERDFKFEELYPLTTDQ 253
            .||:..:.....|.......:|..||:..::......:|...|.:...:.:|     |.|:    
 Worm   156 VPDYSFIVEEGLVLVKGMSDIWELGRISAIDTQNVAVKVLKSGIEISSKRKD-----LVPI---- 211

  Fly   254 DEDDELSSEESNSSMNDNSSDEAESDMDDLEEARRARMVELSLFTFKPTERLGAWEEFTRGIGSK 318
            .|.:|.:.:|.:|              :..:|.::..:..:::      ..||.|.  ..|:|.|
 Worm   212 GEVEEPTKQEQSS--------------ESWKELKQETLGNVTV------GDLGKWN--GGGVGMK 254

  Fly   319 LMEKMGYIHGTGLGSDGRGIVTPVSAQILPQGRSLDACMELREAANGDKDYFSVERK-LKRAQRR 382
            ||.||||..|.|||....|||..:.|:|..:..|||..|             :.:|| :.|.:.:
 Worm   255 LMMKMGYKVGEGLGKRSDGIVHAIQARICKKNASLDEVM-------------TRKRKFIDRKEVQ 306

  Fly   383 QRKADEKAYVRESQRVDVFTFLNDSVLGPGESTQQGEQVTKKAKTNELQQHSTKTLNVETVRIAD 447
            :.|..:|....:...:|:|.|:|..:    |...:......:.:|.|:..:|:|||..:.:.:..
 Worm   307 KNKNIKKLKTTDESEMDIFAFINRKL----EKKNERTFADVRKETQEMAGYSSKTLGAKNLDLEL 367

  Fly   448 EIRRKQRDMAKVKQSLDRNSGDAQLQKRLQVQMQSHKQELATLQAQERSLSKEQQTRKSKNK 509
            |:::.:....|:|..:.||.||.....::...::....::.::..:...:..|..:|.||.|
 Worm   368 ELKQLKEKQNKLKSGIQRNRGDKNTVSKMSESLREVDAKIESINRKLNRIQSEVSSRNSKRK 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4709NP_609331.1 ZnF_C3H1 155..176 CDD:214632 10/20 (50%)
G-patch 312..355 CDD:396249 20/42 (48%)
zgpa-1NP_501296.1 zf-CCCH_4 122..142 CDD:465626 9/20 (45%)
Tudor_ZGPAT 158..211 CDD:410455 9/57 (16%)
G-patch 248..290 CDD:396249 19/41 (46%)

Return to query results.
Submit another query.