DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13126 and RSM22

DIOPT Version :9

Sequence 1:NP_001285787.1 Gene:CG13126 / 34323 FlyBaseID:FBgn0032168 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_012767.1 Gene:RSM22 / 853701 SGDID:S000001638 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:611 Identity:131/611 - (21%)
Similarity:204/611 - (33%) Gaps:230/611 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFSLNFTTRNLVPRLHRF----TSKIAVDVEPAV---VSALEHATLKPRKHPGVVRPNHVELPK 58
            :.||..||:.|| |:|...    ::|..::|.|:.   .::...||            |..|| :
Yeast    13 VRFSSKFTSLNL-PKLDLADFIDSNKRGINVLPSYRDETASTTQAT------------NSKEL-R 63

  Fly    59 QLNDTLK------RIVGDHPVKKLIHDGQQLNAYIKSRHPPPTLEEIENKKRIVIEEVN------ 111
            .|:.||:      ::..:..|.|.|      |..|.:.|.|..|..:.......|:|.|      
Yeast    64 LLSKTLQGQSYRDQLELNPDVSKAI------NNNIMAVHIPNNLRRVATNYYKEIQEPNSLHRPC 122

  Fly   112 -TKMPLDRLATLDEDEAERWRRKRELEINKRLGQRIYAWKRIEYGAYESLVYAIARGAQEYAVLK 175
             |||.:|                                      |:.:.::     .|.|..:.
Yeast   123 RTKMEVD--------------------------------------AHIASIF-----LQNYGSIF 144

  Fly   176 RVLTELAQR--DEQFRPRSFFDFGSGIGTGMWVASE---------------LWREHIFEYYNVDR 223
            :.|.||.:|  .:.|:|:...|.|.|..||:...::               |....:.|...:..
Yeast   145 QSLKELQKRVGPDNFKPQRILDVGYGPATGIVALNDILGPNYRPDLKDAVILGNAEMQERAKIIL 209

  Fly   224 SREMNEISELI-------------------LRDGHENKQIALR-NVF--YRQFLPAIETNYDLVI 266
            ||::||:.:.:                   ..|.|..:.:..: |:.  .|..:|| ...|||:|
Yeast   210 SRQLNEVVDTVEENVSTEKEQETDRRNKNFQEDEHIGEVMTKKINIMTNLRSSIPA-SKEYDLII 273

  Fly   267 ISHTL------FELENKEQREDVLRNLWRKCDGYLVIVEEGTRRGSELVNEARQFLLEQE----- 320
            ::|.|      |.::..|..|..|..|  ...|::||:|.|...|.|::..|||..|..|     
Yeast   274 LTHQLLHDGNQFPIQVDENIEHYLNIL--APGGHIVIIERGNPMGFEIIARARQITLRPENFPDE 336

  Fly   321 --------QEGHTV--------------------APCPHDLVCP---------RLRDLADRTPCN 348
                    ..|.||                    |||||...||         ..::..|...||
Yeast   337 FGKIPRPWSRGVTVRGKKDAELGNISSNYFLKVIAPCPHQRKCPLQVGNPNFYTHKEGKDLKFCN 401

  Fly   349 F------PISYAPLRLGSDFLA----------------------DRHTSLYSYAILKKGSQ---- 381
            |      |.....|:.|. .||                      |.....|||.|.::..:    
Yeast   402 FQKSIKRPKFSIELKKGK-LLATSWDGSQGNASRLKGTGRRNGRDYEILNYSYLIFERSHKDENT 465

  Fly   382 ----------------------SDSSSSWPRIVRPTLVRSKHAICRLCTEKGTLQEVIFTKSKHG 424
                                  .|:.:|||||:...:.|..|.:..||...|.|::...::| ..
Yeast   466 LKEIKKLRNENVNGKYDIGSLGDDTQNSWPRIINDPVKRKGHVMMDLCAPSGELEKWTVSRS-FS 529

  Fly   425 KSAYSCAKVSRWGDRLPMSLGQPQIK 450
            |..|..|:.|:.|| |..|..:.|||
Yeast   530 KQIYHDARKSKKGD-LWASAAKTQIK 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13126NP_001285787.1 Rsm22 156..441 CDD:286344 92/425 (22%)
RSM22NP_012767.1 Rsm22 43..628 CDD:227746 121/580 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 53 1.000 Inparanoid score I1821
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005821
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103043
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4213
TreeFam 00.000 Not matched by this tool.
65.760

Return to query results.
Submit another query.