DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13126 and cox1102

DIOPT Version :9

Sequence 1:NP_001285787.1 Gene:CG13126 / 34323 FlyBaseID:FBgn0032168 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001343002.1 Gene:cox1102 / 5802969 PomBaseID:SPAC19B12.13 Length:753 Species:Schizosaccharomyces pombe


Alignment Length:485 Identity:128/485 - (26%)
Similarity:192/485 - (39%) Gaps:136/485 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SALEHATLKPRKHPGVVRPNHVELPKQLNDTLKRIVGDHPVKKLIHDGQQLNAYIKSRHPPPTLE 97
            |:|....:|.:|..|.: ..|.:....::|.||:..... :||.|:|                  
pombe    67 SSLLDFLVKDQKKSGDI-SLHTKFNLYVDDLLKKSEKGQ-IKKFIND------------------ 111

  Fly    98 EIENKKRIVIEEVNTKMPLDRLATLDEDEAERWRRKRELEINKRLGQRIYAWKRIEYGAYESLVY 162
               .||.:..|   :::|   |:...:||:.|.....::               :.| .::|:.|
pombe   112 ---IKKDLATE---SQLP---LSAPFKDESTRTMTDPQV---------------LAY-IHQSMPY 151

  Fly   163 AIARGAQEYAVLKRVLTEL--AQRDEQFRPRSFFDFGSGIGTGMWVASELWREHIFEYYNVDRSR 225
                   :||.|..|||:|  ...|...:.:...|.|.|.|.|     .|....:|...|.....
pombe   152 -------QYASLYSVLTDLKIVNSDVSCKSQHILDCGKGPGIG-----ALASYSVFPTPNSVSIV 204

  Fly   226 EMNEISELILRDGHEN----------KQIALRNVFYRQFLP-AIETNYDLVIISHTLFELENKEQ 279
            |.|...:.|:.|.|.|          ..:.|..      || ..:.:|.|||.|:.|.|::::::
pombe   205 EENPFLKKIIYDIHHNIYPSTSPNPTSPVTLNR------LPLGKKDSYTLVIASNKLLEMKSEKE 263

  Fly   280 REDVLRNLWRKCD---GYLVIVEEGTRRGSELVNEARQFLLEQEQ-------EGHTVAPCPHDLV 334
            ..|.||:||....   |.||:.|.||:||..|:..||.|||::.:       ..|.|||||||..
pombe   264 LFDYLRSLWSLVSNDGGLLVLCERGTKRGFSLIQRARTFLLQKSKNTSDKQFNAHIVAPCPHDGR 328

  Fly   335 CP-RLRDLADRTPCNF-------PIS--YAPL--RLGSDFLADRHTSLYSYAILKKG-------- 379
            || .:.:......|:|       |.|  |.|.  |..||      .|.|||.:::||        
pombe   329 CPIDIENGVRANICSFKQHFFLSPFSRLYVPRSHRRSSD------RSHYSYVVIQKGITRPLNNT 387

  Fly   380 ---------------SQSDSSSSWPRIVRPTLVRSKHAICRLCTEKGTLQEVIFTKSKHGKSAYS 429
                           ..|.:..:||||:||.|.|..|.|..:|.....|:..|..||: ||.||.
pombe   388 TQRFKNDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVCDSDARLRRNIVPKSQ-GKLAYR 451

  Fly   430 CAKVSRWGDRLPMSLGQPQIKQESIESEEP 459
            .|:.|.|||..|:        :..::|..|
pombe   452 LARKSAWGDLFPL--------EGKVQSTSP 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13126NP_001285787.1 Rsm22 156..441 CDD:286344 103/342 (30%)
cox1102NP_001343002.1 Rsm22 59..561 CDD:227746 128/485 (26%)
COX11 565..753 CDD:225716
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 108 1.000 Domainoid score I1640
eggNOG 1 0.900 - - E1_COG5459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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