DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and pstB

DIOPT Version :10

Sequence 1:NP_788019.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_418181.1 Gene:pstB / 948240 ECOCYCID:EG10783 Length:257 Species:Escherichia coli


Alignment Length:270 Identity:75/270 - (27%)
Similarity:118/270 - (43%) Gaps:52/270 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG----FKTTGVDGSILLNG---- 172
            |.|..|....|.|:......:|:.|.:||||.||||||...:.    :.....:|.|||:|    
E. coli    16 LNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNIL 80

  Fly   173 -RRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNH 236
             ..:|:...|.....:.|.....| :::.:|  ||..::|.:.:|..:.:.|::..|....|:|.
E. coli    81 TNSQDIALLRAKVGMVFQKPTPFP-MSIYDN--IAFGVRLFEKLSRADMDERVQWALTKAALWNE 142

  Fly   237 DQTLTMR----LSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTII 297
            .:....:    |||||::||.||..:...|.|:.||||.:.||..|..::.||:.:| .|..|::
E. coli   143 TKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITEL-KQDYTVV 206

  Fly   298 CTIHQPTAKLFQIFDQVYVLSAGNC------VYQGSTQKLVPFLQSVDLPCPMYHNPA-----DY 351
            ...|.             :..|..|      :|.|   :|:.|..:.||    :..||     ||
E. coli   207 IVTHN-------------MQQAARCSDHTAFMYLG---ELIEFSNTDDL----FTKPAKKQTEDY 251

  Fly   352 IIELACGEYG 361
            |    .|.||
E. coli   252 I----TGRYG 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_788019.1 3a01204 97..689 CDD:273361 75/270 (28%)
pstBNP_418181.1 PstB 1..257 CDD:440734 73/268 (27%)

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