DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and PDR12

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_015267.1 Gene:PDR12 / 856049 SGDID:S000005979 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:184/738 - (24%)
Similarity:295/738 - (39%) Gaps:176/738 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YTNGNEP---SKQPPLEPVVEEEVHFDTDALNNLPAREPVDME----------FKELSLTVKLGF 118
            |..|:.|   ::.........||:   .:|||.    ..||:|          :..|..|:.  :
Yeast   798 YKRGHMPELGTENADARTASREEM---MEALNG----PNVDLEKVIAEKDVFTWNHLDYTIP--Y 853

  Fly   119 NRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGV-DGSILLNGRRRDLP-SFR 181
            :..::::|.:|.|.....::.|:||.|||||:|||:.|:.....|| .|.:|:|.  :.|| ||.
Yeast   854 DGATRKLLSDVFGYVKPGKMTALMGESGAGKTTLLNVLAQRINMGVITGDMLVNA--KPLPASFN 916

  Fly   182 RMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSG 246
            |...|:.|.|.....|:|.|::..||:|:...:|..|||...:|.|:.|||:.|:.:.|..:...
Yeast   917 RSCGYVAQADNHMAELSVRESLRFAAELRQQSSVPLEEKYEYVEKIITLLGMQNYAEALVGKTGR 981

  Fly   247 G----QKKRLSIAMELINNPT-VMFLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAK 306
            |    |:|:|||.:||:..|: ::||||||:||||.|...:::.::.|...|::|:||||||:|.
Yeast   982 GLNVEQRKKLSIGVELVAKPSLLLFLDEPTSGLDSQSAWSIVQFMRALADSGQSILCTIHQPSAT 1046

  Fly   307 LFQIFDQVYVL-SAGNCVYQG-----STQKLVPFLQSVDLPCPMYHNPADYIIE-LACGEYGYDK 364
            ||:.||::.:| ..|..||.|     |...|..|.:...:.|.:..|||:||:. :..|......
Yeast  1047 LFEQFDRLLLLKKGGKMVYFGDIGPNSETLLKYFERQSGMKCGVSENPAEYILNCIGAGATASVN 1111

  Fly   365 VDTLKLATENGSCLTWFHNPS-AVLRAEV--LMRKYPIPKKTKSRSLED---------TSYSNQC 417
            .|...|         |..:|. |..||||  |.|..|      .|::.|         .||..|.
Yeast  1112 SDWHDL---------WLASPECAAARAEVEELHRTLP------GRAVNDDPELATRFAASYMTQI 1161

  Fly   418 SVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREGSRVLDNYNLLFAILMHHSMTTM 482
            ..:|||..::..|.......:....:|.|...|..|..........::.::.:|.:|:   :...
Yeast  1162 KCVLRRTALQFWRSPVYIRAKFFECVACALFVGLSYVGVNHSVGGAIEAFSSIFMLLL---IALA 1223

  Fly   483 MLTVL-TFPMDI----------------SILIKEHF---NRWYSLKAYYTAMTLVDLPISIISCF 527
            |:..| .|..|.                |:|:..|.   |.|.:|                  |.
Yeast  1224 MINQLHVFAYDSRELYEVREAASNTFHWSVLLLCHAAVENFWSTL------------------CQ 1270

  Fly   528 FFTVIVYLWSYQ---PMEWIRFFMFFSISLLTVFVGHSFGLMIGAWF-----DVVNGTFLAPVLT 584
            |...|.|.|..|   ......||.||.:.:..::.     :..|.|.     ||.:.:.:...|.
Yeast  1271 FMCFICYYWPAQFSGRASHAGFFFFFYVLIFPLYF-----VTYGLWILYMSPDVPSASMINSNLF 1330

  Fly   585 IPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGL---------------------- 627
            ..|::|.|.......:|::.|      .|.|.:..|...:..|                      
Yeast  1331 AAMLLFCGILQPREKMPAFWR------RLMYNVSPFTYVVQALVTPLVHNKKVVCNPHEYNIMDP 1389

  Fly   628 --------------DRGT------LACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILV 672
                          |..|      .|.|...||.|....:.:.:..::.|..|.:   .|.|...
Yeast  1390 PSGKTCGEFLSTYMDNNTGYLVNPTATENCQYCPYTVQDQVVAKYNVKWDHRWRN---FGFMWAY 1451

  Fly   673 FRF------VSYVVLKAKIKSIR 689
            ..|      :.|.|::.|:.|::
Yeast  1452 ICFNIAAMLICYYVVRVKVWSLK 1474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 176/703 (25%)
ABCG_EPDR 102..326 CDD:213180 88/241 (37%)
ABC2_membrane 420..623 CDD:279410 43/230 (19%)
PDR12NP_015267.1 3a01205 89..1468 CDD:273362 182/730 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2712
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
43.950

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