DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and PDR5

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_014796.3 Gene:PDR5 / 854324 SGDID:S000005679 Length:1511 Species:Saccharomyces cerevisiae


Alignment Length:638 Identity:173/638 - (27%)
Similarity:280/638 - (43%) Gaps:116/638 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 NGNEP----------SKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKELSLTVKLGFNRGSK 123
            |.|:|          |.:..|:...|||  .||.....|...|.:   |...:|..::.....::
Yeast   826 NANDPENVGERSDLSSDRKMLQESSEEE--SDTYGEIGLSKSEAI---FHWRNLCYEVQIKAETR 885

  Fly   124 EILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGV-DGSILLNGRRRDLPSFRRMSCYI 187
            .||:||.|......|.|:||.|||||:||||.|:...|.|| .|.||:||..|| .||.|...|.
Yeast   886 RILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGDILVNGIPRD-KSFPRSIGYC 949

  Fly   188 TQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGG----Q 248
            .|.|......||.|::..:|.|:....||.|||...:|:::.:|.:..:...:......|    |
Yeast   950 QQQDLHLKTATVRESLRFSAYLRQPAEVSIEEKNRYVEEVIKILEMEKYADAVVGVAGEGLNVEQ 1014

  Fly   249 KKRLSIAMELINNPTVM-FLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFD 312
            :|||:|.:||...|.:: ||||||:||||.:...:.:|:|||.:.|:.|:||||||:|.|.|.||
Yeast  1015 RKRLTIGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEFD 1079

  Fly   313 Q-VYVLSAGNCVYQG----STQKLVPFLQSVDL-PCPMYHNPADYIIEL---ACGEYG---YDKV 365
            : :::...|..||.|    ..:.::.:.:|... .||...|||::::|:   |.|.:.   |.:|
Yeast  1080 RLLFMQRGGKTVYFGDLGEGCKTMIDYFESHGAHKCPADANPAEWMLEVVGAAPGSHANQDYYEV 1144

  Fly   366 DTLKLATENGSCLTWFHNPS-AVLRAEVLMRKYPIPKKTKSRSLEDTSYSNQCSVLLRRGFIKAK 429
                          |.::.. ..:::|:...:..:|||....:.||....:| |::.:       
Yeast  1145 --------------WRNSEEYRAVQSELDWMERELPKKGSITAAEDKHEFSQ-SIIYQ------- 1187

  Fly   430 RDTTMTHLRIGVNIAVAALFGAMYDHTGREGSR-VLDNYNLLF------------AILMHHSMTT 481
              |.:..:|         ||...:.......|: :|..:|.||            ..|.:..:..
Yeast  1188 --TKLVSIR---------LFQQYWRSPDYLWSKFILTIFNQLFIGFTFFKAGTSLQGLQNQMLAV 1241

  Fly   482 MMLTVLTFPMDISIL-----------IKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYL 535
            .|.||:..|:....|           .:|..:|.:|..::..|...|::|.:|::    ..|.|.
Yeast  1242 FMFTVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWISFIFAQIFVEVPWNILA----GTIAYF 1302

  Fly   536 WSYQPM-------------EWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVV-NGTFLAPVLTIP 586
            ..|.|:             |....|..||.:.. |:|| |.||::.::..|. :...||.:|...
Yeast  1303 IYYYPIGFYSNASAAGQLHERGALFWLFSCAFY-VYVG-SMGLLVISFNQVAESAANLASLLFTM 1365

  Fly   587 MMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLACEEAPY 639
            .:.|.|...|...:|.:..:...:|.|.|    ||.|:..:....:..:.|.|
Yeast  1366 SLSFCGVMTTPSAMPRFWIFMYRVSPLTY----FIQALLAVGVANVDVKCADY 1414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 163/600 (27%)
ABCG_EPDR 102..326 CDD:213180 88/230 (38%)
ABC2_membrane 420..623 CDD:279410 49/240 (20%)
PDR5NP_014796.3 ABC_trans_N 46..152 CDD:405234
3a01205 100..1503 CDD:273362 173/638 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.