DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and PDR15

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_010694.1 Gene:PDR15 / 852015 SGDID:S000002814 Length:1529 Species:Saccharomyces cerevisiae


Alignment Length:614 Identity:158/614 - (25%)
Similarity:280/614 - (45%) Gaps:88/614 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PPQVNYTNGNEPSKQPPLEPVVEEEVHFDTDALNN----LPAREPVDMEFKELSLTVKLGFNRGS 122
            |..:....|:.|......:.::::.......:.:|    |...|.: ..:::|...|.:  ..|.
Yeast   838 PGDIENNAGSSPDSATTEKKILDDSSEGSDSSSDNAGLGLSKSEAI-FHWRDLCYDVPI--KGGQ 899

  Fly   123 KEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTGV-DGSILLNGRRRDLPSFRRMSCY 186
            :.||:||.|......|.|:||.|||||:||||.|:...|.|| .|:|.::||.|| .||.|...|
Yeast   900 RRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERVTMGVITGNIFVDGRLRD-ESFPRSIGY 963

  Fly   187 ITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQTLTMRLSGG---- 247
            ..|.|......||.|::..:|.|:...:||.|||...:|:::.:|.:..:...:......|    
Yeast   964 CQQQDLHLKTATVRESLRFSAYLRQPSSVSIEEKNRYVEEVIKILEMQQYSDAVVGVAGEGLNVE 1028

  Fly   248 QKKRLSIAMELINNPTVM-FLDEPTTGLDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIF 311
            |:|||:|.:||...|.:: ||||||:||||.:.....:|::||.:.|:.|:||||||:|.|.|.|
Yeast  1029 QRKRLTIGVELAARPKLLVFLDEPTSGLDSQTAWDTCQLMRKLATHGQAILCTIHQPSAILMQQF 1093

  Fly   312 DQ-VYVLSAGNCVYQG----STQKLVPFLQSVDL-PCPMYHNPADYIIEL---ACGEYG---YDK 364
            |: :::...|..||.|    ..:.::.:.:|... .||...|||::::|:   |.|.:.   |::
Yeast  1094 DRLLFLQKGGQTVYFGDLGEGCKTMIDYFESKGAHKCPPDANPAEWMLEVVGAAPGSHATQDYNE 1158

  Fly   365 V----DTLKLATENGSCLTWFHNPSAVLRAEVLMRKYPIPKKTKSRSLED-----TSYSNQCSVL 420
            |    |..|...|.   |.|             |.| .:|.::|..:.|:     .|...|..::
Yeast  1159 VWRNSDEYKAVQEE---LDW-------------MEK-NLPGRSKEPTAEEHKPFAASLYYQFKMV 1206

  Fly   421 LRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMY-DHTGREGSRVLDNYNLLFAILMHHSMTTMML 484
            ..|.|.:..|.......:.     :..:|..:: ..|..:..|.|..       |.:..::..|.
Yeast  1207 TIRLFQQYWRSPDYLWSKF-----ILTIFNQVFIGFTFFKADRSLQG-------LQNQMLSIFMY 1259

  Fly   485 TVLTFPMDISIL-----------IKEHFNRWYSLKAYYTAMTLVDLPISIIS-----CFFFTVIV 533
            ||:..|:....|           .:|..:|.:|..|::.:..:|::|.:|::     |.::..:.
Yeast  1260 TVIFNPILQQYLPSFVQQRDLYEARERPSRTFSWLAFFLSQIIVEIPWNILAGTIAYCIYYYAVG 1324

  Fly   534 YLWSY----QPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFDVV-NGTFLAPVLTIPMMMFAGF 593
            :..:.    |..|....|..|||:.. |::| |.||::.::.:|. ....:..:|....:.|.|.
Yeast  1325 FYANASAAGQLHERGALFWLFSIAFY-VYIG-SMGLLMISFNEVAETAAHMGTLLFTMALSFCGV 1387

  Fly   594 GVTLRDLPSYLRWGSHISYLRYGLEGFIS 622
            ..|.:.:|.:..:...:|.|.|.::..::
Yeast  1388 MATPKVMPRFWIFMYRVSPLTYMIDALLA 1416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 154/575 (27%)
ABCG_EPDR 102..326 CDD:213180 87/230 (38%)
ABC2_membrane 420..623 CDD:279410 41/225 (18%)
PDR15NP_010694.1 ABC_trans_N 47..162 CDD:405234
3a01205 110..1518 CDD:273362 158/614 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I1517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13430
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R138
SonicParanoid 1 1.000 - - X52
TreeFam 00.000 Not matched by this tool.
44.030

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