DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and ABCG39

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_176867.2 Gene:ABCG39 / 843013 AraportID:AT1G66950 Length:1454 Species:Arabidopsis thaliana


Alignment Length:705 Identity:176/705 - (24%)
Similarity:310/705 - (43%) Gaps:133/705 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PVGNS-------------GGWRNAQSSVTPPPIPTPPQVNYTNGNEPSKQP--PLEPVVEEEVHF 89
            |:|||             |..|..:.||.        ::|.::...|.:..  |.:|:       
plant   802 PLGNSKATVVEEGKDKQKGENRGTEGSVV--------ELNSSSNKGPKRGMVLPFQPL------- 851

  Fly    90 DTDALNNLPAREPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLD 154
             :.|.||:.....:..|.|      ..|......::|.:|.|.|....|.|::|.|||||:||:|
plant   852 -SLAFNNVNYYVDMPSEMK------AQGVEGDRLQLLRDVGGAFRPGILTALVGVSGAGKTTLMD 909

  Fly   155 ALSGFKTTG-VDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYE 218
            .|:|.||.| ::|||.::|..::..:|.|:|.|..|:|...|.:||.|::..:|.|:|...:..:
plant   910 VLAGRKTGGYIEGSISISGYPKNQTTFARVSGYCEQNDIHSPHVTVYESLIYSAWLRLSTDIDIK 974

  Fly   219 EKESRIEDILLL----------LGLYNHDQTLTMRLSGGQKKRLSIAMELINNPTVMFLDEPTTG 273
            .:|..:|:::.|          :||...|     .||..|:|||:||:||:.||:::|:||||:|
plant   975 TRELFVEEVMELVELKPLRNSIVGLPGVD-----GLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1034

  Fly   274 LDSSSCTKVLELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLS-AGNCVYQGS----TQKLVP 333
            ||:.:...|:..::.....|||::||||||:..:|:.||::.::. .|..:|.||    :||||.
plant  1035 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYAGSLGHHSQKLVE 1099

  Fly   334 FLQSVDLPCPMY---HNPADYIIELACGEYGYDKVDTLKLATENGSCLTW---FHNPSAVLRAEV 392
            :.::|: ..|..   :|||.:::            |....:.|:...|.:   |.|.|...|.:.
plant  1100 YFEAVE-GVPKINDGYNPATWML------------DVTTPSMESQMSLDFAQIFSNSSLYRRNQE 1151

  Fly   393 LMRKYPIPK--------KTKSRSLEDTSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALF 449
            |::....|.        |||...    |:|.|......:.:....|......:|..:.:.:..||
plant  1152 LIKDLSTPPPGSKDVYFKTKYAQ----SFSTQTKACFWKQYWSYWRHPQYNAIRFLMTVVIGVLF 1212

  Fly   450 GAMYDHTG--REGSRVLDN-YNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYY 511
            |.::...|  .|..:.|:| :..::|.::...............::.::..:|.....||...|.
plant  1213 GLIFWQIGTKTENEQDLNNFFGAMYAAVLFLGALNAATVQPAIAIERTVFYREKAAGMYSAIPYA 1277

  Fly   512 TAMTLVDLPISIISCFFFTVIVYL-----WSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWF 571
            .:...|::..:.|....:|:|:|.     |:.....|..::|..|....|:     :|:|:.|..
plant  1278 ISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTL-----YGMMLMALT 1337

  Fly   572 D--VVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLR---WGSHISYLRYGL----------EGFI 621
            .  .:.|..::..|:: ..:|:||.:....:|.:.|   |.:.:::..|||          ...|
plant  1338 PNYQIAGICMSFFLSL-WNLFSGFLIPRPQIPIWWRWYYWATPVAWTLYGLITSQVGDKDSMVHI 1401

  Fly   622 SAIYGLDRGTLACEEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFV 676
            |.|..:|..||..|...:.|...|...:..|.      |         ||:|.||
plant  1402 SGIGDIDLKTLLKEGFGFEHDFLPVVAVVHIA------W---------ILLFLFV 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 161/633 (25%)
ABCG_EPDR 102..326 CDD:213180 81/235 (34%)
ABC2_membrane 420..623 CDD:279410 39/225 (17%)
ABCG39NP_176867.2 PLN03140 14..1454 CDD:215599 176/705 (25%)
ABC_trans_N 94..169 CDD:291196
P-loop_NTPase 180..430 CDD:304359
ABC2_membrane 531..737 CDD:279410
PDR_assoc 744..810 CDD:285559 4/7 (57%)
ABCG_PDR_domain2 850..1088 CDD:213199 85/256 (33%)
ABC2_membrane 1183..1388 CDD:279410 37/210 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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