DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and ABCG10

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_175734.1 Gene:ABCG10 / 841761 AraportID:AT1G53270 Length:590 Species:Arabidopsis thaliana


Alignment Length:632 Identity:172/632 - (27%)
Similarity:297/632 - (46%) Gaps:100/632 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LPAREPVD--------MEFKELSLTVKLGFN-------------RGSKEILHNVCGKFPGSQLIA 140
            ||.:.|:.        :|.|.||  .::|.|             :..|.||.:|......:::.|
plant     3 LPVKAPIPGGREISYRLETKNLS--YRIGGNTPKFSNLCGLLSEKEEKVILKDVSCDARSAEITA 65

  Fly   141 IMGPSGAGKSTLLDALSGFKTTG-VDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMH 204
            |.|||||||:|||:.|:|..:.| |.|.:|:|||..|.|.:||:|.::.|:|.|.|.|||.|.:.
plant    66 IAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLT 130

  Fly   205 IAADLKLGQTVSYEEKESRIEDILLLLGLYNH------DQTLTMRLSGGQKKRLSIAMELINNPT 263
            .:|.|:|  ....::..::::.::..||| .|      .|.....:|||:::|:||.:||:::|.
plant   131 YSALLRL--KTKRKDAAAKVKRLIQELGL-EHVADSRIGQGSRSGISGGERRRVSIGVELVHDPN 192

  Fly   264 VMFLDEPTTGLDSSSCTKVLELLKKLT-SQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGS 327
            |:.:||||:||||:|..:|:.|||.:| .||:||:.|||||..::.:..|::.:||.|..|..||
plant   193 VILIDEPTSGLDSASALQVVTLLKDMTIKQGKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGS 257

  Fly   328 TQKLVPFLQSVDLPCPMYHNPADYIIELA----------CGE---YGYDKVDTLKLATENGSCLT 379
            ...|...::......|...|..:|.|::|          |.|   ||:.|              |
plant   258 VYSLHQKIKFSGHQIPRRVNVLEYAIDIAGSLEPIRTQSCREISCYGHSK--------------T 308

  Fly   380 WFHNPSAVLRAEVLMRKYPIPKKTKSRS-LEDTSYSNQCSVLLRRGFIKAKRDTTMTHLRIGVNI 443
            |   .|..:.|...:.:    ..:.|.| ||:.....|.|.   :...:.|:..|...|:..:  
plant   309 W---KSCYISAGGELHQ----SDSHSNSVLEEVQILGQRSC---KNIFRTKQLFTTRALQASI-- 361

  Fly   444 AVAALFGAMYDHTG--REGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYS 506
             ...:.|::|.:.|  ::.::||......|.:....|.||..|.:  |..|..||::|...|.|.
plant   362 -AGLILGSIYLNVGNQKKEAKVLRTGFFAFILTFLLSSTTEGLPI--FLQDRRILMRETSRRAYR 423

  Fly   507 LKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRFFMFFSISL-LTVFVGHSFGLMIGAW 570
            :.:|..|.||:.:|..:|....|...|| |.......:..|::||:.: :.:.:.:||.....|.
plant   424 VLSYVLADTLIFIPFLLIISMLFATPVY-WLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSAL 487

  Fly   571 F-DVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC 634
            . :.:.||.:...|.....:|:|:.:....:|.|..:..::|..:|..|..:...|   ||.:  
plant   488 VPNFIMGTSVISGLMGSFFLFSGYFIAKDRIPVYWEFMHYLSLFKYPFECLMINEY---RGDV-- 547

  Fly   635 EEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVL 681
                         ||::..::..|.|:::..:...|:.:|.:.:.:|
plant   548 -------------FLKQQDLKESQKWSNLGIMASFIVGYRVLGFFIL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 172/632 (27%)
ABCG_EPDR 102..326 CDD:213180 91/252 (36%)
ABC2_membrane 420..623 CDD:279410 46/206 (22%)
ABCG10NP_175734.1 3a01204 27..589 CDD:273361 165/606 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1855
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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