DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and ABCG40

DIOPT Version :10

Sequence 1:NP_788019.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_173005.1 Gene:ABCG40 / 838122 AraportID:AT1G15520 Length:1423 Species:Arabidopsis thaliana


Alignment Length:638 Identity:168/638 - (26%)
Similarity:290/638 - (45%) Gaps:92/638 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EPVDMEFKELSLTVKLG---FNRGSKE----ILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG 158
            ||..:.|..:..:|.:.   ..:|::|    :|..|.|.|....|.|:||.|||||:||:|.|:|
plant   821 EPHSITFDNVVYSVDMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAG 885

  Fly   159 FKTTG-VDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKES 222
            .||.| :||:|.::|..::..:|.|:|.|..|.|...|.:||.|::..:|.|:|.:.|...:::.
plant   886 RKTGGYIDGNITISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDKNKRKI 950

  Fly   223 RIEDILLLLGLYNHDQTLT-----MRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKV 282
            .||:::.|:.|....|.|.     ..||..|:|||:||:||:.||:::|:||||:|||:.:...|
plant   951 FIEEVMELVELTPLRQALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1015

  Fly   283 LELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLS-AGNCVYQG----STQKLVPFLQSVD--L 340
            :..::.....|||::||||||:..:|:.||::::|. .|..:|.|    .:..|:.:.:|:.  .
plant  1016 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRGGEEIYVGPLGHESTHLINYFESIQGIN 1080

  Fly   341 PCPMYHNPADYIIELAC----GEYGYDKVDTLKLATENGSCLTWFHNPSAVLRAEVLMRKYPIPK 401
            .....:|||.:::|::.    ...|.|.....|             |.....|.:.|:::...|.
plant  1081 KITEGYNPATWMLEVSTTSQEAALGVDFAQVYK-------------NSELYKRNKELIKELSQPA 1132

  Fly   402 KTKSRSLEDTSYS----NQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMY-DHTGREGS 461
            .........|.||    .||...|.:......|:...|.:|....|.:|.:||.|: |..|:..:
plant  1133 PGSKDLYFPTQYSQSFLTQCMASLWKQHWSYWRNPPYTAVRFLFTIGIALMFGTMFWDLGGKTKT 1197

  Fly   462 RV-LDN-----YN-LLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDL 519
            |. |.|     |. :||..|.:.:....::.|     :.::..:|.....||...|..|...:::
plant  1198 RQDLSNAMGSMYTAVLFLGLQNAASVQPVVNV-----ERTVFYREQAAGMYSAMPYAFAQVFIEI 1257

  Fly   520 PISIISCFFFTVIVYL-----WSYQPMEWIRFFMFFSISLLTVFVG----------HSFGLMIGA 569
            |..::....:.:|||.     |:.....|..|||:.|....| |.|          |...::..|
plant  1258 PYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFT-FYGMMAVAMTPNHHIASVVSSA 1321

  Fly   570 WFDVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYGLDRGTLAC 634
            ::.:.|             :|:||.:....:|.:..|...:..:.:.|.|.|::.:|.....:|.
plant  1322 FYGIWN-------------LFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITEPMAD 1373

  Fly   635 EEAPYCHYRYPKKFLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKIKS 687
            .....      |:|:.|.....:.|...|.|:.|   :|..:..|:....|||
plant  1374 SNMSV------KQFIREFYGYREGFLGVVAAMNV---IFPLLFAVIFAIGIKS 1417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_788019.1 3a01204 97..689 CDD:273361 168/638 (26%)
ABCG40NP_173005.1 PLN03140 10..1423 CDD:215599 168/638 (26%)

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