DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5853 and ABCG35

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_172973.1 Gene:ABCG35 / 838087 AraportID:AT1G15210 Length:1442 Species:Arabidopsis thaliana


Alignment Length:583 Identity:146/583 - (25%)
Similarity:266/583 - (45%) Gaps:97/583 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PVDMEFKELSLTVKL-------GFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGF 159
            |:.|.|.::...|.:       |......::|..|...|....|.|:||.|||||:||:|.|:|.
plant   837 PLAMSFDDVKYFVDMPAEMREQGVQETRLQLLKGVTSAFRPGVLTALMGVSGAGKTTLMDVLAGR 901

  Fly   160 KTTG-VDGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESR 223
            ||.| ::|.:.::|..:...:|.|:|.|..|.|...|.:||.|::..:|.|:|.:.||.|:|...
plant   902 KTGGYIEGDVRVSGFPKKQETFARISGYCEQTDIHSPQVTVRESLIFSAFLRLAKEVSKEDKLMF 966

  Fly   224 IEDILLLLGLYNHDQTL-----TMRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVL 283
            ::.::.|:.|.:....:     ...||..|:|||:||:||:.||:::|:||||:|||:.:...|:
plant   967 VDQVMELVELVDLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1031

  Fly   284 ELLKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLS-AGNCVYQG----STQKLVPFLQSV-DLP- 341
            ..::.....|||::||||||:..:|:.||::.::. .|:.:|.|    ::.|:|.:.:|. .:| 
plant  1032 RAVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGHVIYSGPLGRNSHKVVEYFESFPGVPK 1096

  Fly   342 CPMYHNPADYII-------ELACGEYGYDKVDTLKLATENGSCLTWFHNPSAVLRAEVLMRKYPI 399
            .|..:|||.:::       ||..|      ||..:|...:..|          .|.:.|:::..:
plant  1097 IPEKYNPATWMLEASSLAAELKLG------VDFAELYKASALC----------QRNKALVQELSV 1145

  Fly   400 PKKTKSRSLEDTSYS----NQCSVLLRRGFIKAKRDTTMTHLRIGVNIAVAALFGAMYDHTGREG 460
            |.:..:.....|.:|    .|....|.:.:....|......:|....:|.:.:.|:::...|.:.
plant  1146 PPQGATDLYFATQFSQNTWGQFKSCLWKQWWTYWRSPDYNLVRFIFTLATSLMIGSVFWQIGGKR 1210

  Fly   461 SRVLDNYNLLFAI--------LMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLV 517
            |.|.|...::.||        :.:.|....|:.|     :.::..:|.....||...|..:....
plant  1211 SNVQDLTMVIGAIYAAVVFVGINNCSTVQPMVAV-----ERTVFYREKAAGMYSAIPYAISQVTC 1270

  Fly   518 DLPISIISCFFFTVIVYL-----WSYQPMEWIRFFMFFSISLLTVFVGHSFGLM----------- 566
            :||..:|...::::|:|.     |......|..|..:||....|.     :|:|           
plant  1271 ELPYVLIQTTYYSLIIYSMVGFEWKASKFLWFIFINYFSFLYWTY-----YGMMTVSLTPNQQVA 1330

  Fly   567 ---IGAWFDVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYG 626
               ..|::.:.|             :|:||.:....:|.:..|...|..:.:.:.|.|::.||
plant  1331 SIFASAFYGIFN-------------LFSGFFIPRPKIPKWWVWYYWICPVAWTIYGLITSQYG 1380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 146/583 (25%)
ABCG_EPDR 102..326 CDD:213180 81/237 (34%)
ABC2_membrane 420..623 CDD:279410 41/229 (18%)
ABCG35NP_172973.1 PLN03140 8..1442 CDD:215599 146/583 (25%)
ABC_trans_N 88..163 CDD:291196
ABCG_PDR_domain1 182..424 CDD:213200
ABC2_membrane 525..731 CDD:279410
PDR_assoc 738..802 CDD:285559
ABCG_PDR_domain2 837..1075 CDD:213199 81/237 (34%)
ABC2_membrane 1170..1375 CDD:279410 40/227 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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