DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and ABCG23

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_197442.2 Gene:ABCG23 / 832061 AraportID:AT5G19410 Length:633 Species:Arabidopsis thaliana


Alignment Length:667 Identity:174/667 - (26%)
Similarity:291/667 - (43%) Gaps:124/667 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NAQSSVTPPPIPTPPQVNYTNGNEPSKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKELSLT 113
            :|.||.:..|:|||                                             ...|||
plant    43 SASSSFSSSPLPTP---------------------------------------------NRYSLT 62

  Fly   114 V-KLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG---FKTTGVDGSILLNGRR 174
            | .|.:......||::|......|:::|::||||.||||||..:||   .|......::|:|.|:
plant    63 VTNLSYTINHTPILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAVLMNNRK 127

  Fly   175 -RDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLLGLYNHDQ 238
             .|....||:..::.|||.|.|||||.|.:..:|...|..:.: :|:|.|:|.:|..|||.....
plant   128 ITDYNQLRRLCGFVPQDDDLLPLLTVKETLMYSAKFSLRDSTA-KEREERVESLLSDLGLVLVQD 191

  Fly   239 TLT-------MRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLT-SQGRT 295
            :..       ..:|||::||:|||:|:|.:|.::.|||||:||||.:..:|:|||..:. |:.||
plant   192 SFVGEGDEEDRGVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVELLATMAKSKQRT 256

  Fly   296 IICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELACGEY 360
            ::.:||||:.::........:||.|:.::.||.:.|...:..:....|...||.::.:|:     
plant   257 VLFSIHQPSYRILDYISDYLILSRGSVIHLGSLEHLEDSIAKLGFQIPEQLNPIEFAMEI----- 316

  Fly   361 GYDKVDTLKLATENGSCLTWFHNPSAVLRAEVLMRKYP--------IPKKTKSRSLEDTSYSNQC 417
                |::|:         |:..|..||:.:..:   :|        |.||...|.|:.|..|..|
plant   317 ----VESLR---------TFKPNSVAVVESSSM---WPENNENDGIISKKEAFRVLDVTEISYLC 365

  Fly   418 SVLLRRGFIKAKRDTTMTHLRIGVNIAVAAL-FGAMYDHTGREGSRVLDNYNLLFAILMHHSMTT 481
            |     .|.|....|....|...:...||.| .|::|....|:...|.:... |||..:...:::
plant   366 S-----RFCKIIYRTKQLFLARTMQAVVAGLGLGSVYTRLKRDEEGVAERLG-LFAFSLSFLLSS 424

  Fly   482 MMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRF 546
            .:..:..:..:..:|:||.....|.:.:|..|.|:..:|...:....|::.|| |.......|:.
plant   425 TVEALPIYLRERRVLMKESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVY-WIVGLNPSIQA 488

  Fly   547 FMFFSISL-LTVFVGHSFGLMIGAWF-DVVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSH 609
            |.||.:.: |.:.:..|..|.:.|.. |.::|..|...:.....:|:|:.:....:|....:..:
plant   489 FSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKPWMFMYY 553

  Fly   610 ISYLRYGLEGFISAIYGLDR------GTLAC----EEAPYCHYRYPKKFLEEITMRGDQFWNDVI 664
            :|..||.||..:...|...|      |.:.|    |:.           |:|..:..|..|   |
plant   554 VSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDV-----------LKERGLDKDTRW---I 604

  Fly   665 ALGVMILVFRFVSYVVL 681
            .:|:|:..|.|  |.:|
plant   605 NVGIMLAFFVF--YRIL 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 167/619 (27%)
ABCG_EPDR 102..326 CDD:213180 83/236 (35%)
ABC2_membrane 420..623 CDD:279410 45/205 (22%)
ABCG23NP_197442.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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