DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG5853 and ABCG30

DIOPT Version :9

Sequence 1:	NP_001260309.1	Gene:	CG5853 / 34322	FlyBaseID:	FBgn0032167	Length:	689	Species:	Drosophila melanogaster
Sequence 2:	NP_001319944.1	Gene:	ABCG30 / 827187	AraportID:	AT4G15230	Length:	1400	Species:	Arabidopsis thaliana

Alignment Length:	638	Identity:	170/638 - (26%)
Similarity:	299/638 - (46%)	Gaps:	107/638 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   101 EPVDMEFKELSLTVKLGFNRGSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTG-V 164
            :|:.:.|:.:...::....: ::::|.::.|......|.::||.|||||:||||.|||.||.| :
plant   804 KPLTVTFQNVQYYIETPQGK-TRQLLSDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGII 867

  Fly   165 DGSILLNGRRRDLPSFRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILL 229
            .|.|.:.|..:...:|.|:|.|..|.|...|.:||.|::..:|.|:|...:..:.|...::::|.
plant   868 KGEIKVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDSKTKNELVKEVLE 932

  Fly   230 LLGLYNHDQTLT-----MRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKL 289
            .:.|.:...::.     ..||..|:|||:||:||:.||:::|:||||||||:.:...|:..:|.:
plant   933 TVELDDIKDSVVGLPGISGLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNV 997

  Fly   290 TSQGRTIICTIHQPTAKLFQIFDQVYVL-SAGNCVYQG----STQKLVPFLQSVD-LP-----CP 343
            ...|||::||||||:..:|:.||::.:: :.|..||.|    ::.|::.:.:|.. ||     |
plant   998 AETGRTVVCTIHQPSIDIFETFDELILMKNGGQLVYYGPPGQNSSKVIEYFESFSGLPKIQKNC- 1061

  Fly   344 MYHNPADYIIEL----ACGEYGYD-----KVDTL----KLATENGSCLTWFHNPSAVLRAEVLMR 395
               |||.:|:::    |..:.|.|     |..||    |:..|..|        ||.|.:|.|
plant  1062 ---NPATWILDITSKSAEEKLGIDFSQSYKDSTLYKQNKMVVEQLS--------SASLGSEAL-- 1113

  Fly   396 KYPIPKKTKSRSLEDTSYSNQCSVLLRRGFIKAK----RDTTMTHLRIGVNIAVAALFGAMYDHT 456
            ::|            :.:|....|.|:....|..    |:.:....||...:..:.|.|.::...
plant  1114 RFP------------SQFSQTAWVQLKACLWKQHYSYWRNPSHNITRIVFILLDSTLCGLLFWQK 1166

  Fly   457 GREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFP-------------MDISILIKEHFNRWYSLK 508
            ..:    ::|...|.:|.      ..|.|::.||             .:.::..:|.|.|.||..
plant  1167 AED----INNQQDLISIF------GSMYTLVVFPGMNNCAAVINFIAAERNVFYRERFARMYSSW 1221

  Fly   509 AYYTAMTLVDLPISIISCFFFTVIVY-LWSYQPMEWIRFFMFFSISLLTVFVGHSFGLMIGAWFD 572
            ||..:..|:::|.|::.....|:||| ...|....:..|:..:||....:...:|..||:....:
plant  1222 AYSFSQVLIEVPYSLLQSLLCTIIVYPTIGYHMSVYKMFWSLYSIFCSLLIFNYSGMLMVALTPN 1286

  Fly   573 VVNGTFLAPVLTIPMMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFISAIYG-LDRGTLACEE 636
            :.....|.......:.:||||.:..:.:|.:..|..::|...:.|||.:|:.|| :|:..|...|
plant  1287 IHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVDKEILVFGE 1351

  Fly   637 APYCHYRYPKK----FLEEITMRGDQFWNDVIALGVMILVFRFVSYVVLKAKI 685
                     ||    |||      |.|.....:|.|  :.|..::|.::.|.:
plant  1352 ---------KKRVSAFLE------DYFGYKHESLAV--VAFVLIAYPIIVATL 1387

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5853	NP_001260309.1	3a01204	97..689	CDD:273361	170/638 (27%)
		ABCG_EPDR	102..326	CDD:213180	79/230 (34%)
		ABC2_membrane	420..623	CDD:279410	46/220 (21%)
ABCG30	NP_001319944.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X52
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910