DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and ABCG19

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_191073.1 Gene:ABCG19 / 824679 AraportID:AT3G55130 Length:725 Species:Arabidopsis thaliana


Alignment Length:634 Identity:178/634 - (28%)
Similarity:292/634 - (46%) Gaps:96/634 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VTPPPIPTPPQV--------NYTNGNEPSKQPPLEPVVEEEVHFDTDALNNLPAREPVDMEFKEL 110
            :||...||..::        ...:|:......|...::      |.:||...|.  |..:.|..|
plant    22 ITPIGSPTLDELLKDCDSFRKGDSGDGVKSDDPAHHII------DVEALYVKPV--PYVLNFNNL 78

  Fly   111 SLTVKL----GFNR--GSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSGFKTTG-VDGSI 168
            ...|.|    ||:|  |.|.:|.:|.|:.....::|::|.||||||||:|||:|....| :.||:
plant    79 QYDVTLRRRFGFSRQNGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSV 143

  Fly   169 LLNGRRRDLPS--FRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIEDILLLL 231
            .||| .:.|.|  .:.:|.|:.|||.|.|:|||.|.:..|::.:|.:::|..:|..|:|.::..|
plant   144 TLNG-EKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQL 207

  Fly   232 GLYNHDQTLT-----MRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLELLKKLTS 291
            ||.|...|:.     ..:|||:::|:||.:::|::|.|:||||||:||||::...|:::||::..
plant   208 GLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQ 272

  Fly   292 QGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPADYIIELA 356
            .|..:|.:||||:|::.::.|::.:||.|..|:.||...|..|......|.|...|         
plant   273 SGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGFFSDFGRPIPEKEN--------- 328

  Fly   357 CGEYGYDKVDTLKLATENGSCLT-----WFHNPSAVLRAEVLMRKYPIPKKTKSRSLED------ 410
            ..|:..|.|..|:.:.|....|.     |..|..:::::.....|.   .:.:|.||::      
plant   329 ISEFALDLVRELEGSNEGTKALVDFNEKWQQNKISLIQSAPQTNKL---DQDRSLSLKEAINASV 390

  Fly   411 --------TSYSNQCSV---------LLRRGFIKAKRD----TTMTHLRIGVNIAVAALFGAM-- 452
                    :|.||..|:         .|...||.|||.    ..|..| :|..||...:.|.:  
plant   391 SRGKLVSGSSRSNPTSMETVSSYANPSLFETFILAKRYMKNWIRMPEL-VGTRIATVMVTGCLLA 454

  Fly   453 -----YDHTGREGSRVLDNYNLLFAILMHHSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYT 512
                 .|||.|.....|    .|||.::.......:..|..|..:..|.::|..:..|...:|..
plant   455 TVYWKLDHTPRGAQERL----TLFAFVVPTMFYCCLDNVPVFIQERYIFLRETTHNAYRTSSYVI 515

  Fly   513 AMTLVDLPISIISCFFFTVIVYLWSYQPMEWIRFFMFFSISLLTVF-VGHSFGLMIGAWFDVVNG 576
            :.:||.||..:.....|:.|.: |:......:..|:|:.:.:...| .|.|....|..   ||..
plant   516 SHSLVSLPQLLAPSLVFSAITF-WTVGLSGGLEGFVFYCLLIYASFWSGSSVVTFISG---VVPN 576

  Fly   577 TFLAPVLTIP----MMMFAGFGVTLRDLPSYLRWGSHISYLRYGLEGFI 621
            ..|..:::|.    .::.:||.|....:|.|..|..:||.|:|..|..:
plant   577 IMLCYMVSITYLAYCLLLSGFYVNRDRIPFYWTWFHYISILKYPYEAVL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 169/583 (29%)
ABCG_EPDR 102..326 CDD:213180 91/237 (38%)
ABC2_membrane 420..623 CDD:279410 54/218 (25%)
ABCG19NP_191073.1 P-loop_NTPase 89..307 CDD:304359 86/218 (39%)
3a01204 90..724 CDD:273361 162/558 (29%)
ABC2_membrane 424..627 CDD:279410 51/211 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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