DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5853 and ABCG18

DIOPT Version :9

Sequence 1:NP_001260309.1 Gene:CG5853 / 34322 FlyBaseID:FBgn0032167 Length:689 Species:Drosophila melanogaster
Sequence 2:NP_191071.1 Gene:ABCG18 / 824677 AraportID:AT3G55110 Length:708 Species:Arabidopsis thaliana


Alignment Length:685 Identity:178/685 - (25%)
Similarity:293/685 - (42%) Gaps:176/685 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 VNYTNGNE-------------------PSKQPPLEPVVEEEVHFDTDALNNLPARE----PVDME 106
            :::|.|||                   |.:..|.:.:           |:..||.|    |..:.
plant    11 ISHTGGNESPTLGELLKDFNDSGRKKYPGENAPTQHI-----------LDLAPAAETRSVPFLLS 64

  Fly   107 FKELSLTV----KLGFNR----GSKEILHNVCGKFPGSQLIAIMGPSGAGKSTLLDALSG-FKTT 162
            |..||..|    :..|:|    ..|.:|.::.|:....:::|::|.||||||||:|||:| ....
plant    65 FNNLSYNVVLRRRFDFSRRKTASVKTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAED 129

  Fly   163 GVDGSILLNGRRRDLPS--FRRMSCYITQDDRLQPLLTVNENMHIAADLKLGQTVSYEEKESRIE 225
            .:.|::.||| .:.|.|  .:.:|.|:.|||.|.|:|||.|.:..|::.:|.:::...:|..|:|
plant   130 SLKGTVTLNG-EKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVE 193

  Fly   226 DILLLLGLYNHDQTLT-----MRLSGGQKKRLSIAMELINNPTVMFLDEPTTGLDSSSCTKVLEL 285
            .::..|||.|...|:.     ..:|||:::|:||.:::|::|.::||||||:||||::...|:::
plant   194 TLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQV 258

  Fly   286 LKKLTSQGRTIICTIHQPTAKLFQIFDQVYVLSAGNCVYQGSTQKLVPFLQSVDLPCPMYHNPAD 350
            ||::...|..:|.:||||:|::..:.|::.:||.|..|:.||...|..|..|...|.|...|   
plant   259 LKRIAQSGSVVIMSIHQPSARIIGLLDRLIILSHGKSVFNGSPVSLPSFFSSFGRPIPEKEN--- 320

  Fly   351 YIIELACGEYGYDKVDTLKLATENGSCLT-----WFHNPSA------------VLRAEVLMRKY- 397
                  ..|:..|.:..|:.::|....|.     |..|.:|            .:.|.|...|. 
plant   321 ------ITEFALDVIRELEGSSEGTRDLVEFNEKWQQNQTARATTQSRVSLKEAIAASVSRGKLV 379

  Fly   398 -------PIPKKTKSRSLEDTSYSNQCSVLLRRGFIKAK-------RDTTMTHLRIGVNIAVAAL 448
                   ||..:|.|      ||:|.   .|...||.||       |...:..:|||..:....|
plant   380 SGSSGANPISMETVS------SYANP---PLAETFILAKRYIKNWIRTPELIGMRIGTVMVTGLL 435

  Fly   449 FGAMY---DHTGREGSRVLDNYNLLFAILMHHSMTTMML----TVLTFPMDISILIKEHFNRWYS 506
            ...:|   |:|.|.....:.    .||.    .|:||..    .:..|..:..|.::|..:..|.
plant   436 LATVYWRLDNTPRGAQERMG----FFAF----GMSTMFYCCADNIPVFIQERYIFLRETTHNAYR 492

  Fly   507 LKAYYTAMTLVDLP----ISII----------------SCFFFTVIVYLWSYQPMEWIRFFMFFS 551
            ..:|..:..||.||    :||.                |.|::.:|:|.            .|:|
plant   493 TSSYVISHALVSLPQLLALSIAFAATTFWTVGLSGGLESFFYYCLIIYA------------AFWS 545

  Fly   552 ISLLTVFVGHSFGLMIGAWFDVVNGTFLAPVLTIP----MMMFAGFGVTLRDLPSYLRWGSHISY 612
            .|.:..|:.   ||        :....::.::||.    .::..||.:....:|.|..|..:||.
plant   546 GSSIVTFIS---GL--------IPNVMMSYMVTIAYLSYCLLLGGFYINRDRIPLYWIWFHYISL 599

  Fly   613 LRYGLEG------------FISAIYGLDRGTLACE 635
            |:|..|.            |:..:...| |||..|
plant   600 LKYPYEAVLINEFDDPSRCFVKGVQVFD-GTLLAE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5853NP_001260309.1 3a01204 97..689 CDD:273361 171/634 (27%)
ABCG_EPDR 102..326 CDD:213180 84/239 (35%)
ABC2_membrane 420..623 CDD:279410 53/252 (21%)
ABCG18NP_191071.1 3a01204 57..707 CDD:273361 168/628 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100076
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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